Metaphylogenomic and potential functionality of the limpet Patella pellucida's gastrointestinal tract microbiome.
Metaphylogenomic and potential functionality of the limpet Patella pellucida's gastrointestinal tract microbiome.
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DOI：
10.3390/ijms151018819
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发表时间：
2014-10-20
影响因子：
5.6
通讯作者：
Gallagher J
中科院分区：
文献类型：
--
作者：
Dudek M;Adams J;Swain M;Hegarty M;Huws S;Gallagher J
研究了食海藻的海洋帽贝Patella pellucida消化道的微生物多样性。使用改进的间接DNA提取方案，并基于特定的原核标记基因进行宏基因组分析，从分析的宏基因组中鉴定细菌群的丰度。变形菌门，厚壁菌门和拟杆菌门的三个显着丰富的门的成员，其特征在于通过文献和他们对主机的预测功能，以及在工业环境中的潜在应用评估。
This study investigated the microbial diversity associated with the digestive tract of the seaweed grazing marine limpet Patella pellucida. Using a modified indirect DNA extraction protocol and performing metagenomic profiling based on specific prokaryotic marker genes, the abundance of bacterial groups was identified from the analyzed metagenome. The members of three significantly abundant phyla of Proteobacteria, Firmicutes and Bacteroidetes were characterized through the literature and their predicted functions towards the host, as well as potential applications in the industrial environment assessed.
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影响因子：
--
作者：
Glavina Del Rio T;Abt B;Spring S;Lapidus A;Nolan M;Tice H;Copeland A;Cheng JF;Chen F;Bruce D;Goodwin L;Pitluck S;Ivanova N;Mavromatis K;Mikhailova N;Pati A;Chen A;Palaniappan K;Land M;Hauser L;Chang YJ;Jeffries CD;Chain P;Saunders E;Detter JC;Brettin T;Rohde M;Göker M;Bristow J;Eisen JA;Markowitz V;Hugenholtz P;Kyrpides NC;Klenk HP;Lucas S
通讯作者：
Lucas S
影响因子：
4.4
作者：
Barns, SM;Grow, CC;Kuske, CR
通讯作者：
Kuske, CR
影响因子：
11.2
作者：
Demirbas, M. Fatih
通讯作者：
Demirbas, M. Fatih
影响因子：
1.5
作者：
Bakunina, IY;Nedashkovskaya, OI;Mikhailov, VV
通讯作者：
Mikhailov, VV
影响因子：
3.7
作者：
Alex, Anoop;Vasconcelos, Vitor;Antunes, Agostinho
通讯作者：
Antunes, Agostinho