GoPubMed: exploring PubMed with the Gene Ontology.
GoPubMed: exploring PubMed with the Gene Ontology.
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DOI：
10.1093/nar/gki470
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发表时间：
2005-07-01
影响因子：
14.9
通讯作者：
Schroeder M
中科院分区：
文献类型：
--
作者：
Doms A;Schroeder M
生物医学文献以惊人的速度增长，PubMed已经包含了超过15 000 000摘要。查找相关文献是一个重点和难点问题。我们介绍了GoPubMed，一个允许用户使用基因本体论(GO)来浏览PubMed搜索结果的Web服务器，GO是一个层次结构的分子生物学词汇表。GoPubMed提供了以下好处：首先，它通过根据摘要进行分类来概述文献摘要，从而允许用户按类别快速浏览摘要。其次，它自动显示与原始查询相关的通用本体术语，这些术语甚至经常不直接出现在摘要中。第三，它使用户能够验证其分类，因为围棋术语在摘要中突出显示，并且每个术语都标有准确率百分比。第四，使用GoPubMed探索PubMed摘要很有用，因为它显示了围棋术语的定义，而不需要进一步查找。GoPubMed的在线地址是。目前，每个查询最多只能查询100篇论文。
The biomedical literature grows at a tremendous rate and PubMed comprises already over 15 000 000 abstracts. Finding relevant literature is an important and difficult problem. We introduce GoPubMed, a web server which allows users to explore PubMed search results with the Gene Ontology (GO), a hierarchically structured vocabulary for molecular biology. GoPubMed provides the following benefits: first, it gives an overview of the literature abstracts by categorizing abstracts according to the GO and thus allowing users to quickly navigate through the abstracts by category. Second, it automatically shows general ontology terms related to the original query, which often do not even appear directly in the abstract. Third, it enables users to verify its classification because GO terms are highlighted in the abstracts and as each term is labelled with an accuracy percentage. Fourth, exploring PubMed abstracts with GoPubMed is useful as it shows definitions of GO terms without the need for further look up. GoPubMed is online at . Querying is currently limited to 100 papers per query.
影响因子：
14.9
作者：
Perez-Iratxeta, C;Pérez, AJ;Andrade, MA
通讯作者：
Andrade, MA