Antiparallel EmrE exports drugs by exchanging between asymmetric structures.

Antiparallel EmrE exports drugs by exchanging between asymmetric structures.
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DOI:
10.1038/nature10703
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发表时间:
2011-12-18
期刊:
影响因子:
64.8
通讯作者:
Henzler-Wildman, Katherine A.
Henzler-Wildman, Katherine A.
中科院分区:
综合性期刊1区
文献类型:
--
作者:
Morrison, Emma A.;DeKoster, Gregory T.;Dutta, Supratik;Vafabakhsh, Reza;Clarkson, Michael W.;Bahl, Arjun;Kern, Dorothee;Ha, Taekjip;Henzler-Wildman, Katherine A.

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小的多药耐药(SMR)转运蛋白提供了一个理想的系统来研究主动转运的最低要求。EmrE是E。大肠杆菌SMR转运蛋白,其输出广泛种类的多环芳香族阳离子底物,从而赋予对与该化学描述匹配的药物化合物的抗性。然而,围绕EmrE同源二聚体的拓扑结构存在很大争议。在这里,我们表明,不对称的反平行EmrE交换之间的内向和外向的国家是相同的,除了他们有相反的方向在膜。我们定量测量这两个国家之间的全球构象交换的衬底结合EmrE在bicelles使用溶液NMR动力学实验。FRET表明,每个二聚体内的单体是反平行的,顺磁弛豫增强NMR实验表明,每个二聚体内的两个单体的差异水的可及性。我们的实验揭示了一个“动态对称性”,调和的不对称EmrE结构与活性位点中的残基的功能对称性。
Small multidrug resistance (SMR) transporters provide an ideal system to study the minimal requirements for active transport. EmrE is an E. coli SMR transporter that exports a broad class of polyaromatic cation substrates, thus conferring resistance to drug compounds matching this chemical description. However, a great deal of controversy has surrounded the topology of the EmrE homodimer. Here we show that asymmetric antiparallel EmrE exchanges between inward- and outward-facing states that are identical except that they have opposite orientation in the membrane. We quantitatively measure the global conformational exchange between these two states for substrate-bound EmrE in bicelles using solution NMR dynamics experiments. FRET reveals that the monomers within each dimer are antiparallel, and paramagnetic relaxation enhancement NMR experiments demonstrate differential water accessibility of the two monomers within each dimer. Our experiments reveal a “dynamic symmetry” that reconciles the asymmetric EmrE structure with the functional symmetry of residues in the active site.
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