Deep Learning Enables Accurate Diagnosis of Novel Coronavirus (COVID-19) With CT Images.

Deep Learning Enables Accurate Diagnosis of Novel Coronavirus (COVID-19) With CT Images.
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深度学习利用 CT 图像准确诊断新型冠状病毒 (COVID-19)

DOI:
10.1109/tcbb.2021.3065361
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发表时间:
2021-11
期刊:
IEEE/ACM transactions on computational biology and bioinformatics
影响因子:
--
通讯作者:
Yang Y
Yang Y
中科院分区:
其他
文献类型:
--
作者:
Song Y;Zheng S;Li L;Zhang X;Zhang X;Huang Z;Chen J;Wang R;Zhao H;Chong Y;Shen J;Zha Y;Yang Y

文献摘要

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新型冠状病毒(COVID-19)最近以急性呼吸道综合征的形式出现,并在全球范围内引发了肺炎疫情。随着COVID-19继续在全球迅速传播,计算机断层扫描(CT)对于快速诊断至关重要。因此,迫切需要开发一种准确的计算机辅助方法,以帮助临床医生通过CT图像识别COVID-19感染的患者。在这里,我们收集了来自中国两个省医院的88名确诊为COVID-19的患者,100名细菌性肺炎患者和86名健康人的胸部CT扫描,以进行比较和建模。基于这些数据,开发了一个基于深度学习的CT诊断系统,以识别COVID-19患者。实验结果表明,我们的模型可以准确区分COVID-19患者和细菌性肺炎患者,AUC为0.95,召回率(灵敏度)为0.96,精确度为0.79。当整合三种类型的CT图像时,我们的模型在区分COVID-19患者与其他患者方面实现了0.93的召回率和0.86的准确率。此外,我们的模型可以提取主要的病变特征,特别是毛玻璃样阴影(GGO),这是视觉上有助于医生的辅助诊断。我们的服务器(http://biomed.nscc-gz.cn/model.php)提供在线服务器,用于在线诊断CT图像。源代码和数据集可在我们的GitHub(https://github.com/SY575/COVID19-CT)上获得。
A novel coronavirus (COVID-19) recently emerged as an acute respiratory syndrome, and has caused a pneumonia outbreak world-widely. As the COVID-19 continues to spread rapidly across the world, computed tomography (CT) has become essentially important for fast diagnoses. Thus, it is urgent to develop an accurate computer-aided method to assist clinicians to identify COVID-19-infected patients by CT images. Here, we have collected chest CT scans of 88 patients diagnosed with COVID-19 from hospitals of two provinces in China, 100 patients infected with bacteria pneumonia, and 86 healthy persons for comparison and modeling. Based on the data, a deep learning-based CT diagnosis system was developed to identify patients with COVID-19. The experimental results showed that our model could accurately discriminate the COVID-19 patients from the bacteria pneumonia patients with an AUC of 0.95, recall (sensitivity) of 0.96, and precision of 0.79. When integrating three types of CT images, our model achieved a recall of 0.93 with precision of 0.86 for discriminating COVID-19 patients from others. Moreover, our model could extract main lesion features, especially the ground-glass opacity (GGO), which are visually helpful for assisted diagnoses by doctors. An online server is available for online diagnoses with CT images by our server (http://biomed.nscc-gz.cn/model.php). Source codes and datasets are available at our GitHub (https://github.com/SY575/COVID19-CT).