Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci.

Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci.
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DOI:
10.1038/ng.717
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发表时间:
2010-12
期刊:
影响因子:
30.8
通讯作者:
--
中科院分区:
生物学1区
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我们对6项克罗恩病全基因组关联研究(GWAS)进行了荟萃分析,其中包括6,333例受影响的个体(病例)和15,056例对照,并对15,694例病例,14,026例对照和414例亲子三人组中的顶级关联信号进行了随访。我们确定了30个新的易感基因座,满足全基因组意义(P< 5 × 10−8)。一系列的计算机模拟分析突出了这些位点中的特定基因,并结合人工筛选,暗示了功能感兴趣的候选基因,包括SMAD 3,ERAP 2,IL 10,IL 2RA,TYK 2,FUT 2,DNMT 3A,DEND1B,BACH 2和TAGAP。结合先前确认的基因座,这些结果确定了71个不同的基因座与克罗恩病相关的全基因组显著证据。
We undertook a meta-analysis of six Crohn's disease genome-wide association studies (GWAS) comprising 6,333 affected individuals (cases) and 15,056 controls and followed up the top association signals in 15,694 cases, 14,026 controls and 414 parent-offspring trios. We identified 30 new susceptibility loci meeting genome-wide significance (P< 5 × 10−8). A series ofin silicoanalyses highlighted particular genes within these loci and, together with manual curation, implicated functionally interesting candidate genes includingSMAD3,ERAP2,IL10,IL2RA,TYK2,FUT2,DNMT3A,DENND1B,BACH2andTAGAP. Combined with previously confirmed loci, these results identify 71 distinct loci with genome-wide significant evidence for association with Crohn's disease.
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