Towards Structured Biomedical Content Authoring and Publishing
Towards Structured Biomedical Content Authoring and Publishing
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DOI：
10.1109/icsc52841.2022.00036
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发表时间：
2022-01
期刊：
影响因子：
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通讯作者：
Steve Fonin Mbouadeu;Asim Abbas;Faizan Ahmed;Fazel Keshtkar;Joan DeBello;Syed Ahmad Chan Bukhari
中科院分区：
文献类型：
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作者：
Steve Fonin Mbouadeu;Asim Abbas;Faizan Ahmed;Fazel Keshtkar;Joan DeBello;Syed Ahmad Chan Bukhari
由于非结构化生物医学信息的扩散，在实现快速和准确地访问在线生物医学内容方面存在重大障碍。伴随着不断增长的生物医学内容的语义注释，对于增强搜索引擎的上下文感知索引、提高搜索速度和检索准确性至关重要。我们已经开发了“语义”：一个生物医学结构化内容创作和发布框架，以增强生物医学内容的公平性(可发现性、可访问性、互操作性和可重用性)。寻找合适的语义词汇表来注释生物医学内容既耗时又具有技术挑战性。通过从一系列生物医学本体论中推荐高度准确的注释，“语义”为用户自动化和简化了这一过程。同样，在内容发布阶段保留内容级语义以促进语义搜索仍然是一个关键的研究挑战。“语义”解决了这一障碍，扩展了schema.org，这是一个社区同意和研究引擎认可的指导方针，用于在Web上发布结构化内容。在未来的工作中，我们的目标是通过社会技术方法通过启用协作标注方案来改进生物医学内容标注过程。该系统的演示可通过以下网址访问：https://gosemantically.com/
Significant barriers exist in achieving fast and accurate access to online biomedical content because of the proliferation of unstructured biomedical information. Accompanying semantic annotations with growing biomedical content is critical to enhancing search engines' context-aware indexing, improving search speeds and retrieval accuracy. We have developed “Semantically”: a biomedical structured content authoring and publishing framework to enhance biomedical content FAIR-ness (Findability, Accessibility, Interoperability, and Reusability). Finding the appropriate semantic vocabulary to annotate biomed-ical content is time-consuming and technically challenging. “Semantically” automates and streamlines this process for users by recommending highly accurate annotations from an array of biomedical ontologies. Similarly, preserving content-level se-mantics at the content publishing stage to foster semantic search remains a critical research challenge. “Semantically” addresses this obstacle by extending schema.org, a community-agreed and research engine endorsed guideline for publishing structured content on the web. In future works, we aim to improve the biomedical content annotation process through a socio-technical approach by enabling a collaborative annotation scheme. The demo of the system is accessible at: https://gosemantically.com/