PRIDEViewer: A novel user‐friendly interface to visualize PRIDE XML files

PRIDEViewer: A novel user‐friendly interface to visualize PRIDE XML files
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PRIDEViewer:一种新颖的用户友好界面,用于可视化 PRIDE XML 文件

DOI:
10.1002/pmic.201000448
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发表时间:
2011
期刊:
影响因子:
3.4
通讯作者:
J. Albar
J. Albar
中科院分区:
生物学3区
文献类型:
--
作者:
J. Medina‐Aunon;J. Carazo;J. Albar

文献摘要

被引文献

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目前的标准化倡议极大地促进了共享蛋白质组学实验得出的信息。这些举措之一是基于XML的存储库Pride(蛋白质组学识别数据库),尽管基于XML的文档乍一看似乎并不提供用户友好的视图。PRIDEViewer是一个新的基于Java的应用程序,它以用户友好的方式以Pride XML文件的形式呈现可用的信息,促进最终用户之间的交互以及对编译后的信息的理解和评估。PRIDEViewer可在以下网址免费获得:http://proteo.cnb.csic.es/prideviewer/.
Current standardization initiatives have greatly contributed to share the information derived by proteomics experiments. One of these initiatives is the XML‐based repository PRIDE (PRoteomics IDEntification database), although an XML‐based document does not appear to present a user‐friendly view at the first glance. PRIDEViewer is a novel Java‐based application that presents the information available in a PRIDE XML file in a user‐friendly manner, facilitating the interaction among end users as well as the understanding and evaluation of the compiled information. PRIDEViewer is freely available at: http://proteo.cnb.csic.es/prideviewer/.