FHIR Genomics: enabling standardization for precision medicine use cases

FHIR Genomics: enabling standardization for precision medicine use cases
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DOI:
10.1038/s41525-020-0115-6
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发表时间:
2020-03-18
影响因子:
5.3
通讯作者:
Warner, Jeremy L.
Warner, Jeremy L.
中科院分区:
医学2区
文献类型:
--
作者:
Alterovitz, Gil;Heale, Bret;Warner, Jeremy L.

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快速医疗保健互操作性资源(FHIR)基因组学的发展,一个可行的和有效的方法交换复杂的临床基因组数据和解释,进行了说明。FHIR Genomics是新兴的Health Level 7 FHIR标准的一个子集,目标是来自日益可用的技术(如下一代测序)的数据。已经采取了大量的护理和反馈集成,以简化实施,促进大规模的互操作性,并使现代应用程序开发成为一个完整的精准医学标准。描述了一个新的用例,将癌症联盟(VICC)的变体解释“元知识库”集成到第三方应用程序中。
The development of Fast Healthcare Interoperability Resources (FHIR) Genomics, a feasible and efficient method for exchanging complex clinical genomic data and interpretations, is described. FHIR Genomics is a subset of the emerging Health Level 7 FHIR standard and targets data from increasingly available technologies such as next-generation sequencing. Much care and integration of feedback have been taken to ease implementation, facilitate wide-scale interoperability, and enable modern app development toward a complete precision medicine standard. A new use case, the integration of the Variant Interpretation for Cancer Consortium (VICC) "meta-knowledgebase" into a third-party application, is described.