PDBsum: summaries and analyses of PDB structures
PDBsum: summaries and analyses of PDB structures
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DOI：
10.1093/nar/29.1.221
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发表时间：
2001-01-01
影响因子：
14.9
通讯作者：
Laskowski, RA
中科院分区：
文献类型：
--
作者：
Laskowski, RA
PDBsum是一个基于网络的数据库，提供了沉积在蛋白质数据库（PDB）中的每种大分子结构的关键信息的大量图像摘要。它包括结构图像、每个蛋白质链二级结构的注释图、PROMOTIF程序生成的详细结构分析、PROCHECK结果摘要以及蛋白质-配体和蛋白质- dna相互作用的示意图。RasMol脚本结构的高度紧密的关键方面，如蛋白质的结构域，PROSITE模式和蛋白质与配体的相互作用，在3D中进行交互式查看，许多链接将用户带到了相关的网站。PDBsum在PDB发布任何新结构时都会更新，并且可以通过http://www.biochem.ucl.ac.uk/bsm/pdbsum免费访问。
PDBsum is a web-based database providing a largely pictorial summary of the key information on each macromolecular structure deposited at the Protein Data Bank (PDB). It includes images of the structure, annotated plots of each protein chain's secondary structure, detailed structural analyses generated by the PROMOTIF program, summary PROCHECK results and schematic diagrams of protein-ligand and protein-DNA interactions. RasMol scripts high-tight key aspects of the structure, such as the protein's domains, PROSITE patterns and protein-ligand interactions, for interactive viewing in 3D, Numerous links take the user to related sites. PDBsum is updated whenever any new structures are released by the PDB and is freely accessible via http://www.biochem.ucl.ac.uk/bsm/pdbsum.