TreeViewJ: An application for viewing and analyzing phylogenetic trees.
TreeViewJ: An application for viewing and analyzing phylogenetic trees.
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TreeViewJ：查看和分析系统发育树的应用程序。
DOI：
10.1186/1751-0473-2-7
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发表时间：
2007-10-31
影响因子：
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通讯作者：
Colosimo, Marc E
中科院分区：
文献类型：
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作者：
Peterson, Matthew W;Colosimo, Marc E
系统发生树被广泛用于可视化不同生物体或同一生物体样本之间的进化关系。有各种各样的免费和商业树木可视化软件可用，但这些程序的局限性往往需要研究人员使用多个程序进行分析，注释和生产出版准备的图像。我们提出了TreeViewJ，一个Java工具，用于可视化，编辑和分析系统发育树。该软件允许研究人员为他们希望突出显示的分支着色和改变其宽度，并为节点添加名称。如果收集日期可用于分类群，软件可以将它们映射到时间轴上，并按升序或降序对树进行排序。TreeViewJ是研究人员可视化、编辑、“装饰”和生成系统发育树的出版准备图像的工具。它是开源的，并在GPL许可证下发布，可在。
Phylogenetic trees are widely used to visualize evolutionary relationships between different organisms or samples of the same organism. There exists a variety of both free and commercial tree visualization software available, but limitations in these programs often require researchers to use multiple programs for analysis, annotation, and the production of publication-ready images. We present TreeViewJ, a Java tool for visualizing, editing and analyzing phylogenetic trees. The software allows researchers to color and change the width of branches that they wish to highlight, and add names to nodes. If collection dates are available for taxa, the software can map them onto a timeline, and sort the tree in ascending or descending date order. TreeViewJ is a tool for researchers to visualize, edit, "decorate," and produce publication-ready images of phylogenetic trees. It is open-source, and released under an GPL license, and available at .