Integrative approaches for finding modular structure in biological networks.

Integrative approaches for finding modular structure in biological networks.
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DOI:
10.1038/nrg3552
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发表时间:
2013-10
期刊:
Nature reviews. Genetics
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系统生物学的一个中心目标是阐明细胞的结构和功能架构。为此,正在为人类和模式生物快速生成大而复杂的分子相互作用网络。生物信息学研究的一个最近的焦点是将这些网络相互整合,并与不同的分子谱相结合,以确定参与共同生物功能的分子和相互作用的集合-即“模块”。在这里,我们将这种综合方法分为四大类,描述其生物信息学原理,并回顾其应用。
A central goal of systems biology is to elucidate the structural and functional architecture of the cell. To this end, large and complex networks of molecular interactions are being rapidly generated for humans and model organisms. A recent focus of bioinformatics research has been to integrate these networks with each other and with diverse molecular profiles to identify sets of molecules and interactions that participate in a common biological function— i.e. ‘modules’. Here, we classify such integrative approaches into four broad categories, describe their bioinformatic principles and review their applications.
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