Draft genome of the oomycete pathogen Phytophthora cactorum strain LV007 isolated from European beech (Fagus sylvatica).
Draft genome of the oomycete pathogen Phytophthora cactorum strain LV007 isolated from European beech (Fagus sylvatica).
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DOI：
10.1016/j.gdata.2017.05.010
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发表时间：
2017-06
期刊：
影响因子：
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通讯作者：
Vetukuri RR
中科院分区：
文献类型：
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作者：
Grenville-Briggs LJ;Kushwaha SK;Cleary MR;Witzell J;Savenkov EI;Whisson SC;Chawade A;Vetukuri RR
疫霉 (Phytophthora cactorum) 是一种寄主范围广泛的植物病原卵菌。 P. cactorum 菌株 LV007 于 2016 年从瑞典马尔默的患病欧洲山毛榉 (Fagus sylvatica) 中分离出来。P. cactorum 菌株 LV007 的基因组草案为 67.81 Mb。它包含 15,567 个重叠群和 21,876 个预测的蛋白质编码基因。正如对其他植物病原疫霉属物种的报道，鉴定出包括 RxLR 和 CRN 家族在内的细胞质效应蛋白。基因组序列已存入 DDBJ/ENA/GenBank，登录号为 NBIJ00000000。本文描述的版本为NBIJ01000000版本。
Phytophthora cactorum is a broad host range phytopathogenic oomycete. P. cactorum strain LV007 was isolated from a diseased European Beech (Fagus sylvatica) in Malmö, Sweden in 2016. The draft genome of P. cactorum strain LV007 is 67.81 Mb. It contains 15,567 contigs and 21,876 predicted protein-coding genes. As reported for other phytopathogenic Phytophthora species, cytoplasmic effector proteins including RxLR and CRN families were identified. The genome sequence has been deposited at DDBJ/ENA/GenBank under the accession NBIJ00000000. The version described in this paper is version NBIJ01000000.