Shape Expressions (ShEx) schemas for the FHIR R5 specification.

Shape Expressions (ShEx) schemas for the FHIR R5 specification.
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FHIR R5 规范的形状表达式 (ShEx) 架构。

DOI:
10.1016/j.jbi.2023.104534
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发表时间:
2023
影响因子:
4.5
通讯作者:
Jiang,Guoqian
Jiang,Guoqian
中科院分区:
医学3区
文献类型:
--
作者:
Sharma,DeepakK;Prud'hommeaux,Eric;Booth,David;Nanjo,Claude;Jiang,Guoqian

文献摘要

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这项工作继续沿着一条富有远见的道路前进,即使用RDF和ShEx等语义Web标准,使医疗数据更易于集成,用于研究和尖端患者护理。这项工作扩展了使用ShEx模式验证FHIR RDF数据的能力,从而增强了使用相同ShEx验证框架处理FHIR和非FHIR数据的语义网络生态系统。它更新了FHIR的ShEx架构以修复悬而未决的问题,并反映了FHIR RDF定义的变化。此外,它还尝试在ShEx模式中表达FHIRPath约束(在XML或JSON模式中没有捕获)。这些扩展的ShEx模式被合并到FHIR R5规范中,并用于成功验证包含在FHIR规范中的FHIR R5示例,揭示了这些示例中的几个错误。
This work continues along a visionary path of using Semantic Web standards such as RDF and ShEx to make healthcare data easier to integrate for research and leading-edge patient care. The work extends the ability to use ShEx schemas to validate FHIR RDF data, thereby enhancing the semantic web ecosystem for working with FHIR and non-FHIR data using the same ShEx validation framework. It updates FHIR's ShEx schemas to fix outstanding issues and reflect changes in the definition of FHIR RDF. In addition, it experiments with expressing FHIRPath constraints (which are not captured in the XML or JSON schemas) in ShEx schemas. These extended ShEx schemas were incorporated into the FHIR R5 specification and used to successfully validate FHIR R5 examples that are included with the FHIR specification, revealing several errors in the examples.