The systems biology markup language (SBML):: a medium for representation and exchange of biochemical network models
The systems biology markup language (SBML):: a medium for representation and exchange of biochemical network models
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DOI：
10.1093/bioinformatics/btg015
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发表时间：
2003-03-01
期刊：
影响因子：
5.8
通讯作者：
Wang, J
中科院分区：
文献类型：
--
作者：
Hucka, M;Finney, A;Wang, J
动机：分子生物技术现在可以建立精心设计的系统模型，但系统生物学社区需要的信息标准，如果模型是共享的，评估和开发cooperatively.Results：我们总结了系统生物学标记语言（SBML）1级，一个免费的，开放的，基于XML的格式表示生化反应网络。SBML是一种独立于软件的语言，用于描述计算生物学许多领域的研究中常见的模型，包括细胞信号传导途径，代谢途径，基因调控等。
Motivation: Molecular biotechnology now makes it possible to build elaborate systems models, but the systems biology community needs information standards if models are to be shared, evaluated and developed cooperatively.Results: We summarize the Systems Biology Markup Language (SBML) Level 1, a free, open, XML-based format for representing biochemical reaction networks. SBML is a software-independent language for describing models common to research in many areas of computational biology, including cell signaling pathways, metabolic pathways, gene regulation, and others.