Dedicated Hardware for Biological Sequence Comparison
Dedicated Hardware for Biological Sequence Comparison
复制标题
用于生物序列比较的专用硬件
DOI：
10.3217/jucs-002-02-0077
复制
发表时间：
1996
期刊：
影响因子：
--
通讯作者：
D. Lavenier
中科院分区：
文献类型：
--
作者：
D. Lavenier
生物序列比对在冯·诺伊曼计算机上是一项耗时的工作。添加用于并行化比较算法的专用硬件可以使执行时间减少几个数量级。本文提出并比较了基于线性处理器阵列上并行化算法的不同专用方法。
Biological sequence comparison is a time consuming task on a Von Neuman computer. The addition of dedicated hardware for parallelizing the comparison algorithms results in a reduction of several orders of magnitude in the execution time. This paper presents and compares different dedicated approaches, based on the parallelization of the algorithms on linear arrays of processors.