Recent technical advances in the study of nucleic acid modifications.

Recent technical advances in the study of nucleic acid modifications.
复制标题

DOI:
10.1016/j.molcel.2021.07.036
复制
发表时间:
2021-10-21
期刊:
影响因子:
16
通讯作者:
Liu, Kathy Fange
Liu, Kathy Fange
中科院分区:
生物学1区
文献类型:
--
作者:
Owens, Michael C.;Zhang, Celia;Liu, Kathy Fange

文献摘要

参考文献

被引文献

相似文献

酶介导的核酸化学修饰是基因表达不可或缺的调节剂。我们对这些修饰的生物化学和生物学意义的理解很大程度上是由不断发展的技术推动的,这些技术能够准确检测、绘制和操纵这些标记。在这里,我们总结了核酸修饰研究的最新技术进展,重点是能够准确检测和绘制这些修饰的技术。对于所讨论的每种修饰(N6-甲基腺苷、5-甲基胞苷、肌苷、假尿苷和 N4-乙酰胞苷),我们首先介绍用于其图谱和检测的“金标准”技术,然后讨论为解决金标准的任何缺点而开发的技术。通过强调这些技术的共性和差异,我们希望为该领域的现状提供一个视角,并为未来技术的发展制定指南。
Enzyme-mediated chemical modifications of nucleic acids are indispensable regulators of gene expression. Our understanding of the biochemistry and biological significance of these modifications has largely been driven by an ever-evolving landscape of technologies that enable accurate detection, mapping, and manipulation of these marks. Here we provide a summary of recent technical advances in the study of nucleic acid modifications with a focus on techniques that allow accurate detection and mapping of these modifications. For each modification discussed (N6-methyladenosine, 5-methylcytidine, inosine, pseudouridine, and N4-acetylcytidine), we begin by introducing the “gold standard” technique for its mapping and detection, followed by a discussion of techniques developed to address any shortcomings of the gold standard. By highlighting the commonalities and differences of these techniques, we hope to provide a perspective on the current state of the field and to lay out a guideline for development of future technologies.
YTHDF2 通过直接招募 CCR4-NOT 去腺苷酶复合物来破坏含有 m(6)A 的 RNA 的稳定性。
DOI: 10.1038/ncomms12626
发表时间: 2016-08-25
影响因子: 16.6
作者:
Du, Hao;Zhao, Ya;He, Jinqiu;Zhang, Yao;Xi, Hairui;Liu, Mofang;Ma, Jinbiao;Wu, Ligang
通讯作者: Wu, Ligang
DOI: 10.1186/s13059-016-1139-1
发表时间: 2017-01-05
期刊: Genome biology
影响因子: 12.3
作者:
Amort T;Rieder D;Wille A;Khokhlova-Cubberley D;Riml C;Trixl L;Jia XY;Micura R;Lusser A
通讯作者: Lusser A
DOI: 10.1371/journal.pgen.1003602
发表时间: 2013-06
期刊: PLoS genetics
影响因子: 4.5
作者:
Edelheit S;Schwartz S;Mumbach MR;Wurtzel O;Sorek R
通讯作者: Sorek R
DOI: 10.1261/rna.036202.112
发表时间: 2013-02-01
期刊: RNA
影响因子: 4.5
作者:
Cattenoz, Pierre B.;Taft, Ryan J.;Mattick, John S.
通讯作者: Mattick, John S.
DOI: 10.1093/nar/gkt1050
发表时间: 2014-02
影响因子: 14.9
作者:
Czudnochowski N;Ashley GW;Santi DV;Alian A;Finer-Moore J;Stroud RM
通讯作者: Stroud RM