The evolutionarily conserved leprecan gene: its regulation by Brachyury and its role in the developing Ciona notochord.

The evolutionarily conserved leprecan gene: its regulation by Brachyury and its role in the developing Ciona notochord.
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DOI:
10.1016/j.ydbio.2009.02.007
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发表时间:
2009-04-15
影响因子:
2.7
通讯作者:
Di Gregorio, Anna
Di Gregorio, Anna
中科院分区:
生物学3区
文献类型:
--
作者:
Dunn, Matthew P.;Di Gregorio, Anna

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在肠道乔纳中,Leprecan被鉴定为脊索特异性转录因子Ciona brachyury(Ci-Bra)的靶标。通过筛选~14kb的Ci-leprecan基因座的顺式调节活性,我们已经确定了一个581bp的最小的脊索特异性顺式调节模块(CRM),其活性依赖于位于ITS序列3‘端的T-box结合位点。这些位点在体外与GST-Ci-Bra融合蛋白特异性结合,而在体外取消结合的突变会导致体内调节活性的丧失或降低。对581个碱基的脊索CRM序列的连续删除表明,该序列也能够通过与Ci-Bra在脊索中利用的相同的T-box位点在肌肉细胞中直接表达,这些T-box位点在体外也被肌肉特异性T-box激活剂Ci-Tbx6b和Ci-Tbx6c结合。此外,我们还创建了旨在干扰Ci-leprecan功能的质粒,并对所产生的表型进行了分类,这些表型包括脊索细胞沿前后轴的可变错位。总之,这些观察结果提供了普遍适用于T-box转录因子及其目标序列的机制洞察力,以及关于Leprecan在早期脊索发育中功能的第一组线索。
In Ciona intestinalis, leprecan was identified as a target of the notochord-specific transcription factor Ciona Brachyury (Ci-Bra). By screening ~14 kb of the Ci-leprecan locus for cis-regulatory activity, we have identified a 581-bp minimal notochord-specific cis-regulatory module (CRM) whose activity depends upon T-box binding sites located at the 3’-end of its sequence. These sites are specifically bound in vitro by a GST-Ci-Bra fusion protein, and mutations that abolish binding in vitro result in loss or decrease of regulatory activity in vivo. Serial deletions of the 581-bp notochord CRM revealed that this sequence is also able to direct expression in muscle cells through the same T-box sites that are utilized by Ci-Bra in the notochord, which are also bound in vitro by the muscle-specific T-box activators Ci-Tbx6b and Ci-Tbx6c. Additionally, we created plasmids aimed to interfere with the function of Ci-leprecan and categorized the resulting phenotypes, which consist of variable dislocations of notochord cells along the anterior-posterior axis. Together, these observations provide mechanistic insights generally applicable to T-box transcription factors and their target sequences, as well as a first set of clues on the function of Leprecan in early chordate development.
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