Regulatory Sequence Analysis Tools
Regulatory Sequence Analysis Tools
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DOI：
10.1093/nar/gkg567
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发表时间：
2003-07-01
影响因子：
14.9
通讯作者：
van Helden, J
中科院分区：
文献类型：
--
作者：
van Helden, J
网络资源调控序列分析工具（RSAT）（http：//rsat.ulb.ac.be/rsat）提供了一系列专用于预测非编码DNA序列中调控位点的软件工具。这些工具包括序列检索、模式发现、模式匹配、基因组规模的模式匹配、特征图绘制、随机序列生成和其他实用程序。替代格式的监管图案（字符串或位置特定的评分矩阵）的表示和几种算法提出了模式发现的支持。RSAT目前拥有超过100个完全测序的基因组，这些数据定期从GenBank更新。
The web resource Regulatory Sequence Analysis Tools (RSAT) (http://rsat.ulb.ac.be/rsat) offers a collection of software tools dedicated to the prediction of regulatory sites in non-coding DNA sequences. These tools include sequence retrieval, pattern discovery, pattern matching, genome-scale pattern matching, feature-map drawing, random sequence generation and other utilities. Alternative formats are supported for the representation of regulatory motifs (strings or position-specific scoring matrices) and several algorithms are proposed for pattern discovery. RSAT currently holds >100 fully sequenced genomes and these data are regularly updated from GenBank.