Determination of −3858G→A and −164C→A genetic polymorphisms of CYP1A2 in blood and saliva by rapid allelic discrimination: large difference in the prevalence of the −3858G→A mutation between Caucasians and Asians

Determination of −3858G→A and −164C→A genetic polymorphisms of CYP1A2 in blood and saliva by rapid allelic discrimination: large difference in the prevalence of the −3858G→A mutation between Caucasians and Asians
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通过快速等位基因区分测定血液和唾液中CYP1A2的−3858G→A和−164C→A遗传多态性:白种人与亚洲人之间−3858G→A突变的患病率存在​​较大差异

DOI:
10.1007/s00228-003-0623-1
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发表时间:
2003
影响因子:
2.9
通讯作者:
M. Wenk
M. Wenk
中科院分区:
医学3区
文献类型:
--
作者:
L. Todesco;M. Török;S. Krähenbühl;M. Wenk

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CYP 1A 2基因中有两个突变,即− 164 C →A(等位基因CYP 1A 2 *F)和− 3858 G →A(等位基因CYP 1A 2 *C),影响酶的诱导。本研究的目的是建立一种高通量的等位基因识别方法,检测这两种突变在唾液和血液中的分布,并确定其在高加索人中的频率。结果和结论对于− 164 C →A突变,我们发现在高加索人群中的等位基因频率为68%,与亚洲人和高加索人的已发表数据相当。对于− 3858 G →A突变,白人的等位基因频率仅为2%,远低于亚洲人报告的~25%(P<0.001)。所提出的等位基因鉴别允许快速和准确地检测这两种突变。唾液和血液中的DNA基因型100%相同。唾液很容易获得,是传统上用于基因分型的静脉血的一种很好的替代品。
IntroductionTwo mutations in CYP1A2, −164C→A (allele CYP1A2*F) and −3858G→A (allele CYP1A2*C), affecting the inducibility of the enzyme, have been published. The aim of this study was to develop a high throughput allelic discrimination assay for these mutations in both saliva and blood and to determine their frequency in Caucasians.MethodsAn allelic discrimination assay, based on the fluorogenic 5′-nuclease activity (TaqMan), was developed for the two mutations. Genomic DNA extracted from 17 saliva and 100 blood samples from Caucasians was analysed.Results and conclusionsFor the −164C→A mutation, we found an allelic frequency of 68% in the Caucasian population, comparable with data published for Asians and Caucasians. For the −3858G→A mutation, the allele frequency was only 2% in Caucasians, a much lower value than the ~25% reported in Asians (P<0.001). The presented allelic discrimination allows fast and accurate detection of these two mutations. Genotype calls were 100% identical for DNA from saliva and blood. Saliva is easily accessible and represents an excellent alternative to the traditionally used venous blood for genotyping.
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