High-Throughput Molecular Dynamics Simulations and Validation of Thermophysical Properties of Polymers for Various Applications

High-Throughput Molecular Dynamics Simulations and Validation of Thermophysical Properties of Polymers for Various Applications
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各种应用的聚合物热物理性质的高通量分子动力学模拟和验证

DOI:
10.26434/chemrxiv.12250229
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发表时间:
2020
影响因子:
5
通讯作者:
Joseph E. Goose
Joseph E. Goose
中科院分区:
化学2区
文献类型:
--
作者:
M. A. F. Afzal;A. Browning;A. Goldberg;M. Halls;J. Gavartin;T. Morisato;Thomas Hughes;D. Giesen;Joseph E. Goose

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的最新进展 图形处理器(GPU)硬件及其改进 原子模拟程序的效率允许 对大量聚合物进行筛选以预测需要的性能 长分子动力学的运行和分析 (MD)大分子体系的轨道。本文概述了一种有效的MD 基于GPU MD模拟和精化的冷却模拟工作流 用于计算玻璃化转变温度(Tg)的优化液体势(OPLS3e)力场 在Bicerano1报告的315种聚合物实验值中,我们观察到与预测的Tg很好地一致 通过对各种聚合物的实验观察得出的值,这些 确认了明显的效用 描述的工作流程。在分段冷却过程中进行模拟计算 在Tg中,聚合物的子集清楚地显示出有序结构 随着温度的降低而发展。这样的聚合物有一点 特定体积与温度曲线上的间断,我们将其关联 与熔化温度(TM)的关系。我们展示了两者的区别 通过检测聚乙烯来区分结晶聚合物和非晶态聚合物。线型 聚乙烯显示出不连续的 比体积与温度的关系图,但我们没有观察到支化聚乙烯模拟的不连续性。
Recent advances in graphics-processing-unit (GPU) hardware and improved efficiencies of atomistic simulation programs allow the screening of a large number of polymers to predict properties that require running and analyzing long Molecular Dynamics (MD) trajectories of large molecular systems. This paper outlines an efficient MD cooling simulation workflow based on GPU MD simulation and the refined Optimized Potentials for Liquids Simulation (OPLS) OPLS3e force field to calculate glass transition temperatures (Tg) of 315 polymers for which experimental values were reported by Bicerano.1 We observed good agreement of predicted Tg values with experimental observation across a wide range of polymers, which confirms the clear utility of the described workflow. During the stepwise cooling simulation for the calculation of Tg, a subset of polymers clearly showed an ordered structure developing as the temperature decreased. Such polymers have a point of discontinuity on the specific volume vs. temperature plot, which we associated with the melting temperature (Tm). We demonstrate the distinction between crystallized and amorphous polymers by examining polyethylene. Linear polyethylene shows a discontinuity in the specific volume vs. temperature plot, but we do not observe the discontinuity for branched polyethylene simulations.
DOI: 10.1038/s41467-020-14656-8
发表时间: 2020-02-14
影响因子: 16.6
作者:
Xie, Renxuan;Weisen, Albree R.;Gomez, Enrique D.
通讯作者: Gomez, Enrique D.