The HUPO proteomics standards initiativeeasing communication and minimizing data loss in a changing world

The HUPO proteomics standards initiativeeasing communication and minimizing data loss in a changing world
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DOI:
10.1093/bib/bbm061
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发表时间:
2008-03-01
影响因子:
9.5
通讯作者:
Hermjakob, Henning
Hermjakob, Henning
中科院分区:
生物学2区
文献类型:
--
作者:
Orchard, Sandra;Hermjakob, Henning

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目前,世界各地的蛋白质组学实验室生成的数据量呈指数级增长,这使得当重新评估原始结论变得重要时,科学家能够交换、比较和检索数据集变得更加重要。这些数据中只有一小部分在文献中发表,并且随着数据格式的过时,重要信息每天都在丢失。人类蛋白质组组织蛋白质组标准倡议 (HUPO-PSI) 的任务是创建数据标准和交换格式,以允许交换和存储此类数据,无论生成数据的硬件和软件如何。本文将介绍该小组的工作、这些标准的创建和实施以及由于他们的努力而建立的符合标准的数据存储库的最新情况。
The amount of data currently being generated by proteomics laboratories around the world is increasing exponentially, making it ever more critical that scientists are able to exchange, compare and retrieve datasets when re-evaluation of their original conclusions becomes important. Only a fraction of this data is published in the literature and important information is being lost every day as data formats become obsolete. The Human Proteome Organisation Proteomics Standards Initiative (HUPO-PSI) was tasked with the creation of data standards and interchange formats to allow both the exchange and storage of such data irrespective of the hardware and software from which it was generated. This article will provide an update on the work of this group, the creation and implementation of these standards and the standards-compliant data repositories being established as result of their efforts.