Evoker: a visualization tool for genotype intensity data.

Evoker: a visualization tool for genotype intensity data.
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DOI:
10.1093/bioinformatics/btq280
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发表时间:
2010-07-15
期刊:
Bioinformatics (Oxford, England)
影响因子:
--
通讯作者:
Barrett JC
Barrett JC
中科院分区:
其他
文献类型:
--
作者:
Morris JA;Randall JC;Maller JB;Barrett JC

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产生大量数据的全基因组关联研究目前正在由世界各地的许多团体进行,因此需要对用户友好的工具来进行数据质量控制和分析。GWAS质量控制的一个关键方面是评估基因型群集图,以验证合理的基因型调用推定相关的snp。Evoker是一个可视化的基因型集群图的工具,并提供了一个解决方案的计算和存储问题相关的工作与这样的大数据集。
Genome-wide association studies, which produce huge volumes of data, are now being carried out by many groups around the world, creating a need for user friendly tools for data quality control and analysis. One critical aspect of GWAS quality control is evaluating genotype cluster plots to verify sensible genotype calling in putatively associated SNPs. Evoker is a tool for visualizing genotype cluster plots, and provides a solution to the computational and storage problems related to working with such large datasets.
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