AnimalQTLdb: a livestock QTL database tool set for positional QTL information mining and beyond.
AnimalQTLdb: a livestock QTL database tool set for positional QTL information mining and beyond.
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DOI：
10.1093/nar/gkl946
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发表时间：
2007-01
影响因子：
14.9
通讯作者：
Reecy, James M
中科院分区：
文献类型：
--
作者：
Hu, Zhi-Liang;Fritz, Eric Ryan;Reecy, James M
动物数量性状基因座数据库(AnimalQTLdb)旨在存储所有公开可用的家畜动物物种QTL数据，研究人员可以从这些数据中轻松地定位和比较物种内的QTL。此外，还增加了数据库工具，将QTL数据与其他类型的基因组信息联系起来，如辐射杂交(RH)图谱、指纹重叠(FPC)物理图谱、与人类基因组的连锁图谱和比较图谱等。目前，该数据库包含1287头猪、630头牛和657只鸡的QTL数据，这些QTL数据动态地链接到各自的RH、FPC和人类比较图谱。我们计划将该工具应用于其他动物物种，并添加更多结构基因组信息进行比对，试图帮助比较结构基因组研究()。
The Animal Quantitative Trait Loci (QTL) database (AnimalQTLdb) is designed to house all publicly available QTL data on livestock animal species from which researchers can easily locate and compare QTL within species. The database tools are also added to link the QTL data to other types of genomic information, such as radiation hybrid (RH) maps, finger printed contig (FPC) physical maps, linkage maps and comparative maps to the human genome, etc. Currently, this database contains data on 1287 pig, 630 cattle and 657 chicken QTL, which are dynamically linked to respective RH, FPC and human comparative maps. We plan to apply the tool to other animal species, and add more structural genome information for alignment, in an attempt to aid comparative structural genome studies ().