A genome-wide association study for celiac disease identifies risk variants in the region harboring IL2 and IL21.

A genome-wide association study for celiac disease identifies risk variants in the region harboring IL2 and IL21.
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DOI:
10.1038/ng2058
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发表时间:
2007-07
期刊:
影响因子:
30.8
通讯作者:
--
中科院分区:
生物学1区
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我们在778例乳糜泻病例和1422例对照中检测了310,605个单核苷酸多态性的相关性。在HLA之外,最显著的发现(rs 13119723,P=2.0 × 10−7,经验全基因组显著性P=0.045)是在KIAA 1109/Tenr/IL 2/IL 21连锁不平衡区组中。相关性在另外两个集合中被独立地证实(在rs6822844,IL 21的24 kB 5'处最强,荟萃分析P=1.3 × 10−14,OR 0.63),表明该区域的遗传变异易患乳糜泻。
We tested 310,605 single-nucleotide polymorphisms for association in 778 celiac disease cases and 1422 controls. Outside the HLA, the most significant finding (rs13119723, P=2.0 × 10−7, empirical genome-wide significance P=0.045) was in the KIAA1109/Tenr/IL2/IL21 linkage disequilibrium block. Association was independently confirmed in two further collections (strongest at rs6822844, 24kB 5' of IL21, meta-analysis P=1.3 × 10−14, OR 0.63), suggesting genetic variation in this region predisposes to celiac disease.
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