The ChEMBL database in 2017.

The ChEMBL database in 2017.
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DOI:
10.1093/nar/gkw1074
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发表时间:
2017-01-04
影响因子:
14.9
通讯作者:
Leach AR
Leach AR
中科院分区:
生物学2区
文献类型:
--
作者:
Gaulton A;Hersey A;Nowotka M;Bento AP;Chambers J;Mendez D;Mutowo P;Atkinson F;Bellis LJ;Cibrián-Uhalte E;Davies M;Dedman N;Karlsson A;Magariños MP;Overington JP;Papadatos G;Smit I;Leach AR

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Chembl是一个开放的大规模生物活性数据库(https://www.ebi.ac.uk/chembl),先前在2012年和2014年核酸研究数据库问题上进行了描述。从那时起,除了从药物化学文献中持续提取数据的持续提取外,数据库还添加了新的生物活性数据来源。其中包括:来自被忽视的疾病筛查的沉积数据集;作物保护数据;药物代谢和处置数据以及专利的生物活性数据。还合并了许多改进和新功能。其中包括使用本体论的测定和目标的注释,包括临床候选目标的目标和适应症,增加药物的代谢途径以及计算结构警报。可以通过Web-Interface,RDF分发,数据下载和RESTFULE-Services访问Chembl数据。
ChEMBL is an open large-scale bioactivity database (https://www.ebi.ac.uk/chembl), previously described in the 2012 and 2014 Nucleic Acids Research Database Issues. Since then, alongside the continued extraction of data from the medicinal chemistry literature, new sources of bioactivity data have also been added to the database. These include: deposited data sets from neglected disease screening; crop protection data; drug metabolism and disposition data and bioactivity data from patents. A number of improvements and new features have also been incorporated. These include the annotation of assays and targets using ontologies, the inclusion of targets and indications for clinical candidates, addition of metabolic pathways for drugs and calculation of structural alerts. The ChEMBL data can be accessed via a web-interface, RDF distribution, data downloads and RESTful web-services.
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