A comparative proteomics resource: proteins of Arabidopsis thaliana.
A comparative proteomics resource: proteins of Arabidopsis thaliana.
复制标题
比较蛋白质组学资源：拟南芥的蛋白质。
DOI：
10.1186/gb-2003-4-8-r51
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发表时间：
2003
期刊：
影响因子：
12.3
通讯作者：
Shindyalov, Ilya N
中科院分区：
文献类型：
--
作者：
Li, Wilfred W;Quinn, Greg B;Alexandrov, Nickolai N;Bourne, Philip E;Shindyalov, Ilya N
利用整合基因组注释管道（iGAP）对拟南芥的蛋白质组蛋白结构和功能域进行了分析。利用整合基因组注释管道（iGAP）对拟南芥的蛋白质组蛋白结构和功能域进行了分析。基于一种扩展了常用领域分类的新颖折叠库，通过折叠识别和线程来分配领域层次上的三维结构。作为比较蛋白质组学资源的一部分，iGAP正被应用于所有可用蛋白质组学中的蛋白质。该数据库可通过网络访问。
Using an integrative genome annotation pipeline (iGAP) for proteome-wide protein structure and functional domain assignment, all the proteins of Arabidopsis thaliana have been analyzed. Using an integrative genome annotation pipeline (iGAP) for proteome-wide protein structure and functional domain assignment, we analyzed all the proteins of Arabidopsis thaliana. Three-dimensional structures at the level of the domain are assigned by fold recognition and threading based on a novel fold library that extends common domain classifications. iGAP is being applied to proteins from all available proteomes as part of a comparative proteomics resource. The database is accessible from the web.