Gene-environment interactions and obesity traits among postmenopausal African-American and Hispanic women in the Women's Health Initiative SHARe Study.

Gene-environment interactions and obesity traits among postmenopausal African-American and Hispanic women in the Women's Health Initiative SHARe Study.
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DOI:
10.1007/s00439-012-1246-3
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发表时间:
2013-03
期刊:
影响因子:
5.3
通讯作者:
Edwards, Todd L.
Edwards, Todd L.
中科院分区:
生物学2区
文献类型:
--
作者:
Edwards, Digna R. Velez;Naj, Adam C.;Monda, Keri;North, Kari E.;Neuhouser, Marian;Magvanjav, Oyunbileg;Kusimo, Ibukun;Vitolins, Mara Z.;Manson, JoAnn E.;O'Sullivan, Mary Jo;Rampersaud, Evadnie;Edwards, Todd L.

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肥胖措施的全基因组关联研究已经确定了与单核苷酸多态性(snp)的关联。然而,尚未对基因-环境相互作用进行大规模评估。我们对来自妇女健康倡议SNP健康协会资源GWAS研究的绝经后非裔美国人和西班牙裔妇女的基因-环境(G×E)相互作用进行了搜索。对身体质量指数(BMI)和腰臀围比(WHR)进行单SNP线性回归,校正了多维尺度衍生的祖先和年龄轴,在种族分层的数据中,非洲裔美国人(N=8,203)有871,512个SNP,西班牙裔美国人(N=3,484)有786,776个SNP。在非裔美国人和西班牙裔美国人中进行了G×E相互作用项的meta分析,对所有snp进行了G×E相互作用测试,这些snp与娱乐性体育活动(小时/周)、饮食能量摄入(千卡/天)、酒精摄入量(分类)、吸烟年数和吸烟(曾经vs从未)有关。吸烟和rs10133840标记物(Q统计值P=0.70, β = - 0.01, P=3.81×10 - 7)是非洲裔美国人和西班牙裔美国人之间一致的G×E相互作用的最有力证据。在一个队列中,G×E相互作用的最有力证据是非洲裔美国人,WHR作为饮食能量摄入和rs9557704的结果(SNP×kcal =−0.04,P=2.17×10−7)。没有结果超过bonferroni校正的统计显著性阈值。
Genome-wide association studies of obesity measures have identified associations with single nucleotide polymorphisms (SNPs). However, no large-scale evaluation of gene-environment interactions has been performed. We conducted a search of gene-environment (G×E) interactions in post-menopausal African-American and Hispanic women from the Women’s Health Initiative SNP Health Association Resource GWAS study. Single SNP linear regression on body mass index (BMI) and waist-to-hip circumference ratio (WHR) adjusted for multidimensional-scaling-derived axes of ancestry and age was run in race-stratified data with 871,512 SNPs available from African-Americans (N=8,203) and 786,776 SNPs from Hispanics (N=3,484). Tests of G×E interaction at all SNPs for recreational physical activity (met-hrs/wk), dietary energy intake (kcal/day), alcohol intake (categorical), cigarette smoking years, and cigarette smoking (ever vs. never) were run in African-Americans and Hispanics adjusted for ancestry and age at interview, followed by meta-analysis of G×E interaction terms. The strongest evidence for concordant G×E interactions in African-Americans and Hispanics was for smoking and marker rs10133840 (Q statistic P=0.70, beta=−0.01, P=3.81×10−7) with BMI as the outcome. The strongest evidence for G×E interaction within a cohort was in African-Americans with WHR as outcome for dietary energy intake and rs9557704 (SNP×kcal =−0.04, P=2.17×10−7). No results exceeded the Bonferroni–corrected statistical significance threshold.
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