MaizeGDB, the community database for maize genetics and genomics

MaizeGDB, the community database for maize genetics and genomics
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DOI:
10.1093/nar/gkh011
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发表时间:
2004-01-01
影响因子:
14.9
通讯作者:
Brendel, V
Brendel, V
中科院分区:
生物学2区
文献类型:
--
作者:
Lawrence, CJ;Dong, OF;Brendel, V

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玉米遗传学和基因组学数据库(MaizeGDB)是玉米序列、原种、表型、基因型和核型变异以及染色体作图数据的中央储存库。此外,MaizeGDB还为2400多名玉米合作研究人员提供联系信息,促进了迅速扩大的玉米社区成员之间的互动。MaizeGDB代表了以前从ZmDB和已被MaizeGDB取代的MaizeDB数据库中获得的所有数据的合成。MaizeGDB提供基于网络的工具,用于从几个组织订购玉米库存,包括玉米遗传合作库存中心和中北部地区植物引种站(NCRPIS)。序列搜索产生的记录显示嵌入式链接,以方便订购克隆序列从不同的群体,包括玉米基因发现项目和克莱姆森大学基因组研究所。实现了直观的Web界面,以方便相关数据之间的导航,并将分析工具嵌入数据显示中。目前正在为指定的专家和一般研究人员开发基于网络的管理工具。MaizeGDB可以在http://www.maizegdb.org/上访问。
The Maize Genetics and Genomics Database (MaizeGDB) is a central repository for maize sequence, stock, phenotype, genotypic and karyotypic variation, and chromosomal mapping data. In addition, MaizeGDB provides contact information for over 2400 maize cooperative researchers, facilitating interactions between members of the rapidly expanding maize community. MaizeGDB represents the synthesis of all data available previously from ZmDB and from MaizeDB-databases that have been superseded by MaizeGDB. MaizeGDB provides web-based tools for ordering maize stocks from several organizations including the Maize Genetics Cooperation Stock Center and the North Central Regional Plant Introduction Station (NCRPIS). Sequence searches yield records displayed with embedded links to facilitate ordering cloned sequences from various groups including the Maize Gene Discovery Project and the Clemson University Genomics Institute. An intuitive web interface is implemented to facilitate navigation between related data, and analytical tools are embedded within data displays. Web-based curation tools for both designated experts and general researchers are currently under development. MaizeGDB can be accessed at http://www.maizegdb.org/.