2Struc: the secondary structure server.

2Struc: the secondary structure server.
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DOI:
10.1093/bioinformatics/btq480
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发表时间:
2010-10-15
期刊:
Bioinformatics (Oxford, England)
影响因子:
--
通讯作者:
Janes RW
Janes RW
中科院分区:
其他
文献类型:
--
作者:
Klose DP;Wallace BA;Janes RW

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摘要:定义蛋白质二级结构的方法通常被认为是从三维坐标指定二级结构的金标准。然而,还有其他方法可供选择。创建了“2Struc:二级结构服务器”,作为八种不同二级结构分配方法的单一访问点。它被设计成能够在分析单个蛋白质的二级结构内容的方法之间进行比较。它还包括第二个功能,即‘比较蛋白质’,以便能够在一组核磁共振模型内比较任何一种方法的二级结构特征,或在两种不同蛋白质的晶体结构之间进行比较。Http://2struc.cryst.bbk.ac.uk联系人:r.w.janes@qmul.ac.uk补充信息:补充数据可从生物信息学在线获得。
Summary: The defined secondary structure of proteins method is often considered the gold standard for assignment of secondary structure from three-dimensional coordinates. However, there are alternative methods. ‘2Struc: The Secondary Structure Server’ has been created as a single point of access for eight different secondary structure assignment methods. It has been designed to enable comparisons between methods for analyzing the secondary structure content for a single protein. It also includes a second functionality, ‘Compare-the-Protein’ to enable comparisons of the secondary structure features from any one method to be made within a collection of nuclear magnetic resonance models, or between the crystal structures of two different proteins. Availability: http://2struc.cryst.bbk.ac.uk Contact: r.w.janes@qmul.ac.uk Supplementary information: Supplementary data are available at Bioinformatics online.
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