Metabolomics Workbench: An international repository for metabolomics data and metadata, metabolite standards, protocols, tutorials and training, and analysis tools.
Metabolomics Workbench: An international repository for metabolomics data and metadata, metabolite standards, protocols, tutorials and training, and analysis tools.
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DOI：
10.1093/nar/gkv1042
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发表时间：
2016-01-04
影响因子：
14.9
通讯作者：
Subramaniam S
中科院分区：
文献类型：
--
作者：
Sud M;Fahy E;Cotter D;Azam K;Vadivelu I;Burant C;Edison A;Fiehn O;Higashi R;Nair KS;Sumner S;Subramaniam S
Metabolomics数据库可在www.metabolomicsworkbench.org上获得，是一个公共存储库，用于存储代谢组学元数据和实验数据，涵盖各种物种和实验平台，代谢物标准，代谢物结构，协议，教程和培训材料以及其他教育资源。它提供了一个计算平台，用于整合、分析、跟踪、存款和传播来自各种代谢组学研究的大量异质数据，包括质谱（MS）和核磁共振光谱（NMR）数据，涵盖20多个不同物种，涵盖所有主要分类类别，包括人类和其他哺乳动物、植物、昆虫、无脊椎动物和微生物。此外，还为一系列代谢物类别、样品类型以及基于MS和NMR的研究提供了许多方案，沿着代谢物结构数据库。代谢物组学平台上可用的研究中表征的代谢物与代谢物结构数据库中的化学结构相关联，以便于进行跨研究的比较分析。Metabolomics是美国国立卫生研究院（NIH）共同基金代谢组学计划数据协调工作的一部分，为更广泛的代谢组学社区提供来自共同基金代谢组学资源核心、代谢物标准和分析工具的数据，并寻求来自世界各地代谢组学研究人员的数据沉积。
The Metabolomics Workbench, available at www.metabolomicsworkbench.org, is a public repository for metabolomics metadata and experimental data spanning various species and experimental platforms, metabolite standards, metabolite structures, protocols, tutorials, and training material and other educational resources. It provides a computational platform to integrate, analyze, track, deposit and disseminate large volumes of heterogeneous data from a wide variety of metabolomics studies including mass spectrometry (MS) and nuclear magnetic resonance spectrometry (NMR) data spanning over 20 different species covering all the major taxonomic categories including humans and other mammals, plants, insects, invertebrates and microorganisms. Additionally, a number of protocols are provided for a range of metabolite classes, sample types, and both MS and NMR-based studies, along with a metabolite structure database. The metabolites characterized in the studies available on the Metabolomics Workbench are linked to chemical structures in the metabolite structure database to facilitate comparative analysis across studies. The Metabolomics Workbench, part of the data coordinating effort of the National Institute of Health (NIH) Common Fund's Metabolomics Program, provides data from the Common Fund's Metabolomics Resource Cores, metabolite standards, and analysis tools to the wider metabolomics community and seeks data depositions from metabolomics researchers across the world.