apTreeshape:: statistical analysis of phylogenetic tree shape
apTreeshape:: statistical analysis of phylogenetic tree shape
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DOI：
10.1093/bioinformatics/bti798
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发表时间：
2006-02-01
期刊：
影响因子：
5.8
通讯作者：
François, O
中科院分区：
文献类型：
--
作者：
Bortolussi, N;Durand, E;François, O
apTreeshape是一个R软件包，致力于使用统计不平衡度量来模拟和分析系统发育树拓扑。它是R软件包“ape”的配套库，提供了阅读、绘图、操作系统发育树和连接到公共系统发育树数据库的额外功能。该软件包的一个优点是包括对经典形状统计的适当校正以及基于似然比统计理论的新测试。
apTreeshape is a R package dedicated to simulation and analysis of phylogenetic tree topologies using statistical imbalance measures. It is a companion library of the R package 'ape', which provides additional functions for reading, plotting, manipulating phylogenetic trees and for connecting to public phylogenetic tree databases. One strength of the package is to include appropriate corrections of classical shape statistics as well as new tests based on the statistical theory of likelihood ratios.