Enhanced PCR amplification of GC-rich DNA templates by gold nanoparticles.

Enhanced PCR amplification of GC-rich DNA templates by gold nanoparticles.
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DOI:
10.1021/am4040448
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发表时间:
2013-11
影响因子:
9.5
通讯作者:
Wenchao Yang;Xinhui Li;Jielin Sun;Zhifeng Shao
Wenchao Yang;Xinhui Li;Jielin Sun;Zhifeng Shao
中科院分区:
材料科学2区
文献类型:
--
作者:
Wenchao Yang;Xinhui Li;Jielin Sun;Zhifeng Shao

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金纳米颗粒(AuNPs)已被报道,以促进双链DNA的解离和提高几个PCR系统的性能。在这里,我们研究了AuNPs对富含GC的DNA扩增的影响。我们发现,金纳米颗粒可以增强PCR扩增的GNAS 1启动子区(约84% GC)介导的Pfu或Taq DNA聚合酶。然而,在AuNP的最佳浓度下,需要更高量的Taq。此外,还能高效扩增出富含GC的智人FMR 1基因(GC率为80.4%)和铜绿假单胞菌exoT基因(GC率为67.3%)、exsE基因(GC率为71%)和pqqF基因(GC率为74%)。AuNPs可以成为富GC PCR的有效添加剂,并有助于基础和临床研究中具有挑战性的基因组序列的分析。
Gold nanoparticles (AuNPs) have been reported to facilitate double-stranded DNA dissociation and improve performance of several PCR systems. Here we investigated AuNPs' effect on GC-rich DNA amplification. We found that AuNPs could enhance PCR amplification of the GNAS1 promoter region (∼84% GC) mediated by Pfu or Taq DNA polymerase. However, under optimal concentrations of AuNPs, higher amounts of Taq were required. Furthermore, the GC-rich FMR1 (80.4% GC) gene of Homo sapiens as well as exoT (67.3% GC), exsE (71% GC) and pqqF genes (74% GC) of Pseudomonas aeruginosa were also efficiently amplified. AuNPs can become an effective additive in GC-rich PCR and facilitate analysis of challenging genomic sequence in basic and clinical research.