Microbial Community Controls on Sulfide Oxidation Rates and Cave Formation in a Subsurface Biogeochemical System

该项目旨在发现控制微生物群落组装和多样性的规则，以及这些规则对地球化学过程速率的影响。这些问题在大多数生态系统中很难解决，因为那里的微生物多样性非常高，空间异质性很大。Frasassi洞穴生态系统远离固定碳和氮的地表来源，仅通过硫氧化提供燃料，因此微生物活动与硫酸生产直接相关。洞穴主机中性和pH 0-1的硫氧化社区，这些社区类型将进行比较，以测试假设的微生物多样性和社区功能。例如，我们假设，微生物多样性是强烈控制可用的电子供体和电子受体的数量，而不是由环境极端，如低pH值的限制。在这种情况下，pH 0-1和中性Frasassi微生物群落将有较低的多样性比以前研究的pH 0-1酸性矿山排水系统，其中铁和硫的电子供体。该项目还旨在确定对硫酸生产（洞穴溶解）的生物和地质控制。分子生物学方法将用于量化微生物种群，地球化学方法将用于记录和监测洞穴栖息地和微生物培养，脂质和同位素标记方法将用于量化生物量并识别洞穴群落中的自养微生物。该项目将涉及6名本科毕业论文学生，并开发一个教育模块，该模块将被纳入意大利非常成功的卡尔顿学院地质学课程。这项工作将产生年轻的科学家，他们在地质微生物学和出版物方面接受过跨学科培训，这些出版物确定了控制负责硫酸生产和洞穴形成的地下微生物群落的结构和功能的因素。更一般地说，了解微生物群落是如何组装的，以及这些组装模式如何影响可用资源的使用，是了解古代和现代环境的地球化学的关键组成部分。

This project aims to discover rules governing microbial community assembly and diversity, and the effects of these on geochemical process rates. These questions are difficult to address in most ecosystems, where microbial diversity is very high and spatial heterogeneities are large. The Frasassi cave ecosystem is distant from surface sources of fixed carbon and nitrogen and is fueled only by sulfur oxidation, so that microbial activity can be directly related to sulfuric acid production. The cave hosts both neutral and pH 0-1 sulfur-oxidizing communities, and these community types will be compared to test hypothesis about microbial diversity and community function. For example, we hypothesize that microbial diversity is strongly controlled by the number of available electron donors and electron acceptors, rather than by limitations posed by environmental extremes such as low pH. In this case, both pH 0-1 and neutral Frasassi microbial communities will have lower diversity than a previously studied pH 0-1 acid mine drainage system where both iron and sulfur electron donors are available. The project also aims to identify biological and geological controls on sulfuric acid production (cave dissolution). Molecular biological methods will be used to quantify microbial populations, geochemical methods to document and monitor cave habitats and microbial cultures, and lipid and isotope-labeling methods to quantify biomass and identify autotrophic microorganisms in the cave communities.The project will involve 6 undergraduate thesis students and the development of an educational module to be incorporated into the highly successful Carleton College Geology Program in Italy. The work will generate young scientists with interdisciplinary training in geomicrobiology and publications that identify factors that control the structure and function of subsurface microbial communities responsible for sulfuric acid production and cave formation. More generally, understanding how microbial communities are assembled, and how these patterns of assembly affect the use of available resources, is a critical component of understanding the biogeochemistry of both ancient and present-day environments.