Ocean Acidification: A Systems Biology Approach to Characterize Diatom Response to Ocean Acidification and Climate Change

硅藻约占世界海洋初级生产量的40%，是最具生产力的海洋浮游植物群体。它们构成沿海和海洋上升区食物网的基础，支持重要的渔业，并在全球碳和硅循环中发挥重要作用。该项目的目标是了解海洋酸化与其他应激源结合在一起对海洋硅藻假海藻的影响。这个项目将产生一个硅藻所有基因表达的预测模型，可以用来预测硅藻对酸化海洋的预测环境情景的反应。将使用实验室和实地研究相结合的方法；硅藻将在反映当今价值和未来预测条件的二氧化碳浓度下生长，光照水平和营养物质浓度也将有所不同。将使用计算和建模方法测量和整合生理和基因表达反应，以获得对硅藻对海洋酸化反应的公正、系统水平的了解。这种结合的方法将能够预测和预测硅藻对环境变化的反应，以及对自然环境中与生物化学相关的过程的阐明和基因组解释。更广泛的影响：这项研究的结果和预测模型可以与环境模型结合起来，预测硅藻在变化的海洋中的作用和行为。除了对一名博士后研究员和一名研究生进行多学科培训外，该项目还将雇用3000名高中教师和他们的学生。研究人员将继续开发教育工具，以增加K-12学生对全球碳循环的理解，这一代人将越来越多地受到包括海洋酸化在内的环境变化的影响。

Diatoms account for approximately 40 percent of primary production in the world's oceans and are the most productive marine phytoplankton group. They form the basis of food webs in coastal and ocean upwelling areas that support important fisheries and have a major role in global carbon and silicon cycles. The goal of this project is to understand the impact of ocean acidification, in combination with other stressors, on the marine diatom Thalassiosira pseudonana. This project will generate a predictive model of expression of all genes of this diatom that can be used to forecast the diatom's response to projected environmental scenarios to an acidifying ocean. A combination of laboratory and field studies will be used; diatoms will be grown under carbon dioxide concentrations that reflect today's values as well as future predicted conditions and light levels and nutrients concentrations will also be varied. Physiological and gene expression responses will be measured and integrated using computational and modeling methods to gain an unbiased, systems-level understanding of the response of diatoms to ocean acidification. This combined approach will enable the forecasting and prediction of the diatom's response to environmental change and the elucidation and genomic interpretation of biochemically relevant processes in natural environment. Broader impacts: Results and the predictive model from this study can be coupled with environmental models to forecast the role and behavior of diatoms in the changing seas. In addition to the multidisciplinary training of a post-doctoral fellow and a graduate student this project will engage 3 high school teachers and their students. The investigators will continue to develop educational tools to increase the understanding of global carbon cycles by K-12 students, a generation that will be increasingly affected by the environmental changes that include ocean acidification.