ABI Innovation: Building and sharing molecular visualizations with Molecular ViewBook
ABI Innovation:使用 Molecular ViewBook 构建和共享分子可视化
基本信息
- 批准号:1326378
- 负责人:
- 金额:$ 43.24万
- 依托单位:
- 依托单位国家:美国
- 项目类别:Continuing Grant
- 财政年份:2013
- 资助国家:美国
- 起止时间:2013-01-01 至 2014-07-31
- 项目状态:已结题
- 来源:
- 关键词:
项目摘要
The University of Utah is awarded a grant to develop new software tools that will allow researchers to create and share accurate and dynamic visual molecular models of molecular processes. As we gain a deeper understanding of the complexity and dynamics of molecular mechanisms, the need for modeling tools that will synthesize diverse molecular and cellular data becomes more urgent. 3D animation software offers an attractive solution to this need, but has been adopted by only a small number of researchers due to the steep learning curve for most 3D graphics applications. This project seeks to enable researchers to create dynamic visualizations of the molecular processes they study, and to share these visualizations with others in the research and educational communities. The Molecular ViewBook project is broken into two major components. First, the 3D Molecular Toolkit, a suite of free software tools that will allow users to start creating molecular animations in an open-source animation software package after viewing a short tutorial. The 3D Molecular Toolkit will include modules that cover all aspects of molecular animation, including easy-to-use tools to import and manipulate structural data, create conformational changes in protein models, and dynamically build higher-order molecular structures. The second component is the Molecular ViewBook website (http://MolecularViewbook.org), a portal which will enable users to share their animations and animation source codes with others. From the Molecular ViewBook website, users can search for molecular animations that other users have created, and modify these animations to add new components.Molecular animations are increasingly recognized and utilized as a powerful means to communicate complex molecular mechanisms to a wide variety of audiences. In the past several years, we have witnessed a large and rapidly growing interest amongst researchers to be able to create animations. To aid in the dissemination of the Molecular ViewBook, these investigators will conduct local and national workshops for researchers. They will also introduce an Educational Portal that will target biology educators and students at the high school and college levels, thereby expanding our user community beyond the scope of the research community.
犹他州大学获得了一笔赠款,用于开发新的软件工具,使研究人员能够创建和共享分子过程的准确和动态的可视化分子模型。 随着我们对分子机制的复杂性和动力学有了更深入的了解,对合成不同分子和细胞数据的建模工具的需求变得更加迫切。3D动画软件为这一需求提供了一个有吸引力的解决方案,但由于大多数3D图形应用程序的学习曲线陡峭,只有少数研究人员采用。 该项目旨在使研究人员能够创建他们研究的分子过程的动态可视化,并与研究和教育社区的其他人分享这些可视化。 Molecular ViewBook项目分为两个主要部分。 首先是3D分子工具包,这是一套免费的软件工具,允许用户在观看简短的教程后开始在开源动画软件包中创建分子动画。 3D分子工具包将包括涵盖分子动画各个方面的模块,包括易于使用的工具,用于导入和操作结构数据,在蛋白质模型中创建构象变化,以及动态构建高阶分子结构。 第二个组件是Molecular ViewBook网站(MolecularViewbook.org),这是一个使用户能够与其他人分享他们的动画和动画源代码的门户网站。 从Molecular ViewBook网站上,用户可以搜索其他用户创建的分子动画,并修改这些动画以添加新的组件。分子动画越来越多地被认为是向各种观众传达复杂分子机制的有力手段。 在过去的几年里,我们目睹了研究人员对能够创建动画的巨大且快速增长的兴趣。 为了帮助分子观点书的传播,这些研究人员将为研究人员举办地方和国家讲习班。 他们还将推出一个教育门户网站,目标是高中和大学的生物学教育工作者和学生,从而将我们的用户社区扩展到研究社区的范围之外。
项目成果
期刊论文数量(0)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
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Janet Iwasa其他文献
3D animation for integrative modeling of dynamic molecular mechanisms
- DOI:
10.1016/j.bpj.2023.11.2102 - 发表时间:
2024-02-08 - 期刊:
- 影响因子:
- 作者:
Margot Riggi;Janet Iwasa - 通讯作者:
Janet Iwasa
Cdc48 Hexamer in a complex with substrate and Shp1(Ubx Domain)
Cdc48 六聚体与底物和 Shp1(Ubx 结构域)形成复合物
- DOI:
10.2210/pdb6opc/pdb - 发表时间:
2019 - 期刊:
- 影响因子:56.9
- 作者:
I. Cooney;Han Han;Michael G. Stewart;Richard H. Carson;D. Hansen;Janet Iwasa;John C. Price;Christopher P. Hill;Peter S Shen - 通讯作者:
Peter S Shen
Janet Iwasa的其他文献
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{{ truncateString('Janet Iwasa', 18)}}的其他基金
RAPID: Building a visual consensus model of the SARS-CoV-2 life cycle
RAPID:建立 SARS-CoV-2 生命周期的视觉共识模型
- 批准号:
2033695 - 财政年份:2020
- 资助金额:
$ 43.24万 - 项目类别:
Standard Grant
ABI Innovation: Building and sharing molecular visualizations with Molecular ViewBook
ABI Innovation:使用 Molecular ViewBook 构建和共享分子可视化
- 批准号:
1062164 - 财政年份:2011
- 资助金额:
$ 43.24万 - 项目类别:
Continuing Grant
Discovery Corps Postdoctoral Fellowship: Visualizing the Chemical Origins of Life for Research and Education
发现军团博士后奖学金:可视化生命的化学起源以用于研究和教育
- 批准号:
0856412 - 财政年份:2008
- 资助金额:
$ 43.24万 - 项目类别:
Standard Grant
Discovery Corps Postdoctoral Fellowship: Visualizing the Chemical Origins of Life for Research and Education
发现军团博士后奖学金:可视化生命的化学起源以用于研究和教育
- 批准号:
0610117 - 财政年份:2006
- 资助金额:
$ 43.24万 - 项目类别:
Standard Grant
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