Deep learning on genome sequence to identify epistatic effects in complex diseases
Deep learning on genome sequence to identify epistatic effects in complex diseases
基因组序列深度学习可识别复杂疾病的上位效应
批准号：
20K15773
负责人：
Koido Masaru
金额：
$2.66万
依托单位：
依托单位国家：
日本
项目类别：
Grant-in-Aid for Early-Career Scientists
财政年份：
2020
资助国家：
日本
项目状态：
已结题
起止时间：
2020-04-01 至 2023-03-31
中文摘要
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英文摘要
期刊论文(16)
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DOI：
10.1038/s41586-022-05165-3
发表时间：
2022-11
期刊：
NATURE
影响因子：
64.8
作者：
[Mishra, Aniket, Malik, Rainer, Hachiya, Tsuyoshi, Jurgenson, Tuuli, Namba, Shinichi, Posner, Daniel C., Kamanu, Frederick K., Koido, Masaru, Le Grand, Quentin, Shi, Mingyang, He, Yunye, Georgakis, Marios K., Caro, Ilana, Krebs, Kristi, Liaw, Yi-Ching, Vaura, Felix C., Lin, Kuang, Winsvold, Bendik Slagsvold, Srinivasasainagendra, Vinodh, Parodi, Livia, Bae, Hee-Joon, Chauhan, Ganesh, Chong, Michael R., Tomppo, Liisa, Akinyemi, Rufus, Roshchupkin, Gennady V., Habib, Naomi, Jee, Yon Ho, Thomassen, Jesper Qvist, Abedi, Vida, Carcel-Marquez, Jara, Nygaard, Marianne, Leonard, Hampton L., Yang, Chaojie, Yonova-Doing, Ekaterina, Knol, Maria J., Lewis, Adam J., Judy, Renae L., Ago, Tetsuro, Amouyel, Philippe, Armstrong, Nicole D., Bakker, Mark K., Bartz, Traci M., Bennett, David A., Bis, Joshua C., Bordes, Constance, Borte, Sigrid, Cain, Anael, Ridker, Paul M., Cho, Kelly, Chen, Zhengming, Cruchaga, Carlos, Cole, John W., de Jager, Phil L., de Cid, Rafael, Endres, Matthias, Ferreira, Leslie E., Geerlings, Mirjam I., Gasca, Natalie C., Gudnason, Vilmundur, Hata, Jun, He, Jing, Heath, Alicia K., Ho, Yuk-Lam, Havulinna, Aki S., Hopewell, Jemma C., Hyacinth, Hyacinth I., Inouye, Michael, Jacob, Mina A., Jeon, Christina E., Jern, Christina, Kamouchi, Masahiro, Keene, Keith L., Kitazono, Takanari, Kittner, Steven J., Konuma, Takahiro, Kumar, Amit, Lacaze, Paul, Launer, Lenore J., Lee, Keon-Joo, Lepik, Kaido, Li, Jiang, Li, Liming, Manichaikul, Ani, Markus, Hugh S., Marston, Nicholas A., Meitinger, Thomas, Mitchell, Braxton D., Montellano, Felipe A., Morisaki, Takayuki, Mosley, Thomas H., Nalls, Mike A., Nordestgaard, Borge G., O'Donnell, Martin J., Okada, Yukinori, Onland-Moret, N. Charlotte, Ovbiagele, Bruce, Peters, Annette, Psaty, Bruce M., Rich, Stephen S., Rosand, Jonathan, Sabatine, Marc S., Sacco, Ralph L., Saleheen, Danish, Sandset, Else Charlotte, Salomaa, Veikko, Sargurupremraj, Muralidharan, Sasaki, Makoto, Satizabal, Claudia L., Schmidt, Carsten O., Shimizu, Atsushi, Smith, Nicholas L., Sloane, Kelly L., Sutoh, Yoichi, Sun, Yan V., Tanno, Kozo, Tiedt, Steffen, Tatlisumak, Turgut, Torres-Aguila, Nuria P., Tiwari, Hemant K., Tregouet, David-Alexandre, Trompet, Stella, Tuladhar, Anil Man, Tybjaerg-Hansen, Anne, van Vugt, Marion, Vibo, Riina, Verma, Shefali S., Wiggins, Kerri L., Wennberg, Patrik, Woo, Daniel, Wilson, Peter W. F., Xu, Huichun, Yang, Qiong, Yoon, Kyungheon, Millwood, Iona Y., Gieger, Christian, Ninomiya, Toshiharu, Grabe, Hans J., Jukema, J. Wouter, Rissanen, Ina L., Strbian, Daniel, Kim, Young Jin, Chen, Pei-Hsin, Mayerhofer, Ernst, Howson, Joanna M. M., Irvin, Marguerite R., Adams, Hieab, Wassertheil-Smoller, Sylvia, Christensen, Kaare, Ikram, Mohammad A., Rundek, Tatjana, Worrall, Bradford B., Lathrop, G. Mark, Riaz, Moeen, Simonsick, Eleanor M., Korv, Janika, Franca, Paulo H. C., Zand, Ramin, Prasad, Kameshwar, Frikke-Schmidt, Ruth, de Leeuw, Frank-Erik, Liman, Thomas, Haeusler, Karl Georg, Ruigrok, Ynte M., Heuschmann, Peter Ulrich, Longstreth, W. T., Jung, Keum Ji, Bastarache, Lisa, Pare, Guillaume, Damrauer, Scott M., Chasman, Daniel I., Rotter, Jerome I., Anderson, Christopher D., Zwart, John-Anker, Niiranen, Teemu J., Fornage, Myriam, Liaw, Yung-Po, Seshadri, Sudha, Fernandez-Cadenas, Israel, Walters, Robin G., Ruff, Christian T., Owolabi, Mayowa O., Huffman, Jennifer E., Milani, Lili, Kamatani, Yoichiro, Dichgans, Martin, Debette, Stephanie, Lee, Jin-Moo, Cheng, Yu-Ching, Meschia, James F., Chen, Wei Min, Sale, Michele M., Zonderman, Alan B., Evans, Michele K., Wilson, James G., Correa, Adolfo, Traylor, Matthew, Lewis, Cathryn M., Reiner, Alexander, Haessler, Jeffrey, Langefeld, Carl D., Gottesman, Rebecca F., Yaffe, Kristine, Liu, Yong Mei, Kooperberg, Charles, Lange, Leslie A., Furie, Karen L., Arnett, Donna K., Benavente, Oscar R., Grewal, Raji P., Peddareddygari, Leema Reddy, Hveem, Kristian, Lindstrom, Sara, Wang, Lu, Smith, Erin N., Gordon, William, Vlieg, Astrid van Hylckama, de Andrade, Mariza, Brody, Jennifer A., Pattee, Jack W., Brumpton, Ben M., Suchon, Pierre, Chen, Ming-Huei, Frazer, Kelly A., Turman, Constance, Germain, Marine, MacDonald, James, Braekkan, Sigrid K., Armasu, Sebastian M., Pankratz, Nathan, Jackson, Rebecca D., Nielsen, Jonas B., Giulianin, Franco, Puurunen, Marja K., Ibrahim, Manal, Heckbert, Susan R., Bammler, Theo K., McCauley, Bryan M., Taylor, Kent D., Pankow, James S., Reiner, Alexander P., Gabrielsen, Maiken E., Deleuze, Jean-Francois, O'Donnell, Chris J., Kim, Jihye, McKnight, Barbara, Kraft, Peter, Hansen, John-Bjarne, Rosendaal, Frits R., Heit, John A., Tang, Weihong, Morange, Pierre-Emmanuel, Johnson, Andrew D., Kabrhel, Christopher, van Dijk, Ewoud J., Koudstaal, Peter J., Luijckx, Gert-Jan, Nederkoorn, Paul J., van Oostenbrugge, Robert J., Visser, Marieke C., Wermer, Marieke J. H., Kappelle, L. Jaap, Esko, Tonu, Metspalu, Andres, Magi, Reedik, Nelis, Mari, Levi, Christopher R., Maguire, Jane, Jimenez-Conde, Jordi, Sharma, Pankaj, Sudlow, Cathie L. M., Rannikmae, Kristiina, Schmidt, Reinhold, Slowik, Agnieszka, Pera, Joanna, Thijs, Vincent N. S., Lindgren, Arne G., Ilinca, Andreea, Melander, Olle, Engstrom, Gunnar, Rexrode, Kathryn M., Rothwell, Peter M., Stanne, Tara M., Johnson, Julie A., Danesh, John, Butterworth, Adam S., Heitsch, Laura, Boncoraglio, Giorgio B., Kubo, Michiaki, Pezzini, Alessandro, Rolfs, Arndt, Giese, Anne-Katrin, Weir, David, Ross, Owen A., Lemmons, Robin, Soderholm, Martin, Cushman, Mary, Jood, Katarina, McDonough, Caitrin W., Bell, Steven, Linkohr, Birgit, Lee, Tsong-Hai, Putaala, Jukka, Lopez, Oscar L., Carty, Cara L., Jian, Xueqiu, Schminke, Ulf, Cullell, Natalia, Delgado, Pilar, Ibanez, Laura, Krupinski, Jerzy, Lioutas, Vasileios, Matsuda, Koichi, Montaner, Joan, Muino, Elena, Roquer, Jaume, Sarnowski, Chloe, Sattar, Naveed, Sibolt, Gerli, Teumer, Alexander, Rutten-Jacobs, Loes, Kanai, Masahiro, Gretarsdottir, Solveig, Rost, Natalia S., Yusuf, Salim, Almgren, Peter, Ay, Hakan, Bevan, Steve, Brown, Robert D., Jr., Carrera, Caty, Buring, Julie E., Chen, Wei-Min, Cotlarciuc, Ioana, de Bakker, Paul I. W., DeStefano, Anita L., den Hoed, Marcel, Duan, Qing, Engelter, Stefan T., Falcone, Guido J., Gustafsson, Stefan, Hassan, Ahamad, Holliday, Elizabeth G., Howard, George, Hsu, Fang-Chi, Ingelsson, Erik, Harris, Tamara B., Kissela, Brett M., Kleindorfer, Dawn O., Langenberg, Claudia, Leys, Didier, Lin, Wei-Yu, Lorentzen, Erik, Magnusson, Patrik K., McArdle, Patrick F., Pulit, Sara L., Rice, Kenneth, Sakaue, Saori, Sapkota, Bishwa R., Tanislav, Christian, Thorleifsson, Gudmar, Thorsteinsdottir, Unnur, Tzourio, Christophe, van Duijn, Cornelia M., Walters, Matthew, Wareham, Nicholas J., Amin, Najaf, Aparicio, Hugo J., Attia, John, Beiser, Alexa S., Berr, Claudine, Bustamante, Mariana, Caso, Valeria, Choi, Seung Hoan, Chowhan, Ayesha, Dartigues, Jean-Francois, Delavaran, Hossein, Dorr, Marcus, Ford, Ian, Gurpreet, Wander S., Hamsten, Anders, Hozawa, Atsushi, Ingelsson, Martin, Iwasaki, Motoki, Kaffashian, Sara, Kalra, Lalit, Kjartansson, Olafur, Kloss, Manja, Labovitz, Daniel L., Laurie, Cathy C., Li, Linxin, Lind, Lars, Lindgren, Cecilia M., Makoto, Hirata, Minegishi, Naoko, Morris, Andrew P., Mueller-Nurasyid, Martina, Norrving, Bo, Ogishima, Soichi, Parati, Eugenio A., Pedersen, Nancy L., Perola, Markus, Jousilahti, Pekka, Pileggi, Silvana, Rabionet, Raquel, Riba-Llena, Iolanda, Ribases, Marta, Romero, Jose R., Rudd, Anthony G., Sarin, Antti-Pekka, Sarju, Ralhan, Satoh, Mamoru, Sawada, Norie, Sigurdsson, Asgeir, Smith, Albert, Stine, O. Colin, Stott, David J., Strauch, Konstantin, Takai, Takako, Tanaka, Hideo, Touze, Emmanuel, Tsugane, Shoichiro, Uitterlinden, Andre G., Valdimarsson, Einar M., van der Lee, Sven J., Wakai, Kenji, Williams, Stephen R., Wolfe, Charles D. A., Wong, Quenna, Yamaji, Taiki, Sanghera, Dharambir K., Stefansson, Kari, Martinez-Majander, Nicolas, Sobue, Kenji, Soriano-Tarraga, Carolina, Volzke, Henry, Akpa, Onoja, Sarfo, Fred S., Akpalu, Albert, Obiako, Reginald, Wahab, Kolawole, Osaigbovo, Godwin, Owolabi, Lukman, Komolafe, Morenikeji, Jenkins, Carolyn, Arulogun, Oyedunni, Ogbole, Godwin, Adeoye, Abiodun M., Akinyemi, Joshua, Agunloye, Atinuke, Fakunle, Adekunle G., Uvere, Ezinne, Olalere, Abimbola, Adebajo, Olayinka J., Chen, Junshi, Clarke, Robert, Collins, Rory, Guo, Yu, Wang, Chen, Lv, Jun, Peto, Richard, Chen, Yiping, Fairhurst-Hunter, Zammy, Hill, Michael, Pozarickij, Alfred, Schmidt, Dan, Stevens, Becky, Turnbull, Iain, Yu, Canqing, Nagai, Akiko, Murakami, Yoishinori, Shiroma, Eric J., Sigurdsson, Sigurdur, Ghanbari, Mohsen, Boerwinkle, Eric, Fongang, Bernard, Wang, Ruiqi, Ikram, Mohammad K., Volker, Uwe, de Laat, Karlijn F., van Norden, Anouk G. W., de Kort, Paul L., Vermeer, Sarah E., Brouwers, Paul J. A. M., Gons, Rob A. R., den Heijer, Tom, van Dijk, Gert W., van Rooij, Frank G. W., Aamodt, Anne H., Skogholt, Anne H., Willer, Cristen J., Heuch, Ingrid, Hagen, Knut, Fritsche, Lars G., Pedersen, Linda M., Ellekjaer, Hanne, Zhou, Wei, Martinsen, Amy E., Kristoffersen, Espen S., Thomas, Laurent F., Kleinschnitz, Christoph, Frantz, Stefan, Ungethum, Kathrin, Gallego-Fabrega, Cristina, Lledos, Miquel, Llucia-Carol, Laia, Sobrino, Tomas, Campos, Francisco, Castillo, Jose, Freijo, Marimar, Arenillas, Juan Francisco, Obach, Victor, Alvarez-Sabin, Jose, Molina, Carlos A., Ribo, Marc, Munoz-Narbona, Lucia, Lopez-Cancio, Elena, Millan, Monica, Diaz-Navarro, Rosa, Vives-Bauza, Cristofol, Serrano-Heras, Gemma, Segura, Tomas, Dhar, Rajat, Delgado-Mederos, Raquel, Prats-Sanchez, Luis, Camps-Renom, Pol, Blay, Natalia, Sumoy, Lauro, Marti-Fabregas, Joan, Schnohr, Peter, Jensen, Gorm B., Benn, Marianne, Afzal, Shoaib, Kamstrup, Pia R., van Setten, Jessica, van der Laan, Sander W., Vonk, Jet M. J., Kim, Bong-Jo, Curtze, Sami, Tiainen, Marjaana, Kinnunen, Janne, Menon, Vilas, Sung, Yun Ju, Yang, Chengran, Saillour-Glenisson, Florence, Gravel, Simon]
通讯作者：
Gravel, Simon
DOI：
10.1101/2020.03.29.011205
发表时间：
2020-03
期刊：
bioRxiv
影响因子：
--
作者：
[Masaru Koido;C. Hon;S. Koyama;H. Kawaji;Y. Murakawa;K. Ishigaki;K. Ito;J. Sese;Y. Kamatani;Piero Carninci;C. Terao]
通讯作者：
Masaru Koido;C. Hon;S. Koyama;H. Kawaji;Y. Murakawa;K. Ishigaki;K. Ito;J. Sese;Y. Kamatani;Piero Carninci;C. Terao
遺伝的リスクを生物学的に解釈するゲノム・オミックス・ヒト細胞モデルの統合解析
基因组、组学和人类细胞模型的综合分析，从生物学角度解释遗传风险
基因组、组学和人类细胞模型的综合分析，从生物学角度解释遗传风险
DOI：
--
发表时间：
2022
期刊：
影响因子：
--
作者：
[Kamikawa R, Mochizuki T, Sakamoto M, Tanizawa Y, Nakayama T, Onuma R, Cenci U, Moog D, Speak S, Sarkozi K, Toseland A, van Oosterhout C, Oyama K, Kato M, Kume K, Kayama M, Azuma T, Ishii K, Miyashita H, Henrissat B, Lombard V, Win J, Kamoun S, Kashiyama Y, Mayama S, Miyagishima S, 小井土大]
通讯作者：
小井土大
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METR 发布工具
DOI：
--
发表时间：
期刊：
影响因子：
--
作者：
[]
通讯作者：
元WET研究者によるオミクス統合解析手法の開発
前WET研究员开发的整合组学分析方法
前WET研究员开发的整合组学分析方法
DOI：
--
发表时间：
2022
期刊：
影响因子：
--
作者：
[田中冴, 荒川和晴, 小井土大]
通讯作者：
小井土大
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