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Novel approach to obtain enzymatic reaction mechanisms on the free energy surface

Novel approach to obtain enzymatic reaction mechanisms on the free energy surface
获得自由能表面酶促反应机制的新方法
批准号:
23550021
负责人:
ASADA Toshio
金额:
$3.49万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (C)
财政年份:
2011
资助国家:
日本
项目状态:
已结题
起止时间:
2011 至 2013

项目摘要

项目成果

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中文摘要
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英文摘要
Most of the reactions can be observed in the molecular assembly such as liquid or biological systems. In order to design new functional molecules, the theoretical investigations are necessary to explore hidden inter-molecular interactions. In this research, new theoretical approaches and a computational program have been developed. Reasonable charge polarization of the molecules can be evaluated very quickly compared to the expensive quantum mechanical calculation. Using our techniques, the optimized reaction path in the molecular assemble can be obtained, and the impressive future development of the functional molecular design are provided.
期刊论文(0)
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会议论文
Theoretical investigation of inhibitor mechanism in trypsin-BPTI using ab initio QM/MM-MD simulation
使用从头开始 QM/MM-MD 模拟对胰蛋白酶-BPTI 抑制剂机制进行理论研究
DOI: --
发表时间: 2011
期刊:
影响因子: --
作者: [T.Asada, N.Takenaka, S.Koseki, M.Nagaoka]
通讯作者: M.Nagaoka
Ab initio electron correlation studies of the intracluster reaction NO^+ (H_2O)_n → H_3O^+(H_2O)_<n-2> (HONO) at n=4 and 5
n=4 和 5 时簇内反应 NO^+ (H_2O)_n → H_3O^+(H_2O)_<n-2> (HONO) 的从头电子相关研究
DOI: 10.1039/c0cp01077d
发表时间: 2011
期刊: Phys.Chem.Chem.Phys
影响因子: --
作者: [T.Asada, S.Koseki and M.Nagaoka]
通讯作者: S.Koseki and M.Nagaoka
Efficient algorithm to optimize structures and reaction paths on free energy surface using QM/MM MD simulation
使用 QM/MM MD 模拟优化自由能表面结构和反应路径的高效算法
DOI: --
发表时间: 2013
期刊:
影响因子: --
作者: [S. Yamanaka, K. Kanda, T. Saito, Y. Umena, K. Kawakami, J. -R. Shen, N. Kamiya, M. Okumura, H. Nakamura, K. Yamaguchi, H. Nakano, Toshio Asada]
通讯作者: Toshio Asada
DOI: --
发表时间: 2012
期刊:
影响因子: --
作者: [T.Asada, K.Sakurai, M.Nagaoka]
通讯作者: M.Nagaoka
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