Development of an evolutionary algorithm for function optimization problems with an equality constraint and its application to the inference of genetic networks
Development of an evolutionary algorithm for function optimization problems with an equality constraint and its application to the inference of genetic networks
批准号:
23700266
负责人:
KIMURA Shuhei
金额:
$1.33万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Young Scientists (B)
财政年份:
2011
资助国家:
日本
项目状态:
已结题
起止时间:
2011 至 2013
中文摘要
在这项研究中,我提出了一种技术,使进化算法能够解决具有多个不等式和单个不等式约束的函数优化问题。所提出的技术只是强制新生成的候选解满足等式约束。为了生成这些候选解,本研究使用了马尔可夫链蒙特卡罗方法和交叉核。该技术是为了提高遗传网络推理方法的性能而开发的。然而,我发现,即使遗传网络的推理不被定义为没有等式约束的函数优化问题,也可以推断出合理的网络。因此,本研究提出了两种不使用上述技术的遗传网络推断方法。
英文摘要
In this study, I proposed a technique that makes evolutionary algorithms possible to solve function optimization problems with several inequality and a single equality constraints. The proposed technique simply forces candidate solutions newly generated to satisfy the equality constraint. To generate these candidate solutions, this study uses a Markov chain Monte Carlo method and crossover kernels. This technique is developed for improving the performances of the genetic network inference methods. I found however that, even when the inference of genetic networks is not defined as a function optimization problem without having an equality constraint, reasonable networks are inferred. Thus, this study then proposed two genetic network inference methods that do not use the technique described above.
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Development of an Efficient Parameter Estimation Method for the Inference of Vohradsky's Neural Network Models of Genetic Networks
开发用于遗传网络 Vohradsky 神经网络模型推理的有效参数估计方法
DOI:
--
发表时间:
2013
期刊:
Proc. of the 2013 International Joint Conference on Neural Networks
影响因子:
--
作者:
[S.Kimura, M.Sato and M.Okada-Hatakeyama]
通讯作者:
M.Sato and M.Okada-Hatakeyama
Constrained Multimodal Function Optimization using a Simple Evolutionary Algorithm
使用简单进化算法的约束多峰函数优化
DOI:
--
发表时间:
2011
期刊:
Proc. of the 2011 Congress on Evolutionary Computation
影响因子:
--
作者:
[Yoshifumi Kusunoki, Tetsuzo Tanino, S.Kimura and K.Matsumura]
通讯作者:
S.Kimura and K.Matsumura
遺伝子ネットワークのS-system モデル高速同定法
基因网络S系统模型快速识别方法
DOI:
--
发表时间:
2011
期刊:
影响因子:
--
作者:
[Yoshifumi Kusunoki, Tetsuzo Tanino, 木村周平]
通讯作者:
木村周平
DOI:
10.1371/journal.pone.0083308
发表时间:
2013
期刊:
PloS one
影响因子:
3.7
作者:
[Kimura S, Sato M, Okada-Hatakeyama M]
通讯作者:
Okada-Hatakeyama M
Inference of S-system Models of Genetic Networks by Solving Linear Programming Problems and Sets of Linear Algebraic Equations
通过求解线性规划问题和线性代数方程组来推断遗传网络的 S 系统模型
DOI:
--
发表时间:
2012
期刊:
Proc. of the 2012 International Joint Conference on Neural Networks
影响因子:
--
作者:
[S.Kimura, K.Matsumura and M.Okada-Hatakeyama]
通讯作者:
K.Matsumura and M.Okada-Hatakeyama
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