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共生性渦鞭毛藻類 Amphidiniumsp. のゲノムおよび毒素生合成

共生性渦鞭毛藻類 Amphidiniumsp. のゲノムおよび毒素生合成
共生甲藻 Amphidiniumsp.
批准号:
17J00597
负责人:
BEEDESSEE Girish
金额:
$1.79万
依托单位国家:
日本
项目类别:
Grant-in-Aid for JSPS Fellows
财政年份:
2017
资助国家:
日本
项目状态:
已结题
起止时间:
2017-04-26 至 2020-03-31

项目摘要

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中文摘要
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We completed the genome of Amphidinium gibbosum and using an integrated omics approach, we surveyed the mechanisms of secondary metabolite biosynthesis. We combined genomics, transcriptomics and microRNAomics using sequencing data from Illumina and Pacbio.We identified key enzymes needed to make secondary metabolites.We also found that under nutrient conditions ( nitrate), secondary metabolites biosynthesis is downregulated because of the probably role of a miRNA.Such information is helpful in helping understand harmful algal bloom formation.We also identified several molecular events such as alternative splicing in secondary metabolite genes, that affect their expression.Taken together, we propose 2 strategies for the synthesis of secondary metabolites in dinoflagellates that include iterative use of enzymes.
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DOI: --
发表时间: 2019
期刊:
影响因子: --
作者: [Beedessee Girish, Hisata Kanako, Roy Michael C., Van Dolah Frances M., Satoh Noriyuki, Shoguchi Eiichi, Girish Beedessee]
通讯作者: Girish Beedessee
Transcriptomic analysis reveals expression of multifunctional secondary metabolite biosynthesis gene clusters in dinoflagellates.
转录组分析揭示了甲藻中多功能次级代谢物生物合成基因簇的表达。
DOI: --
发表时间: 2017
期刊:
影响因子: --
作者: [Girish Beedessee, Eiichi Shoguchi, Noriyuki Satoh]
通讯作者: Noriyuki Satoh
Genome-wide survey of polyketide synthases in the symbiotic dinoflagellate Symbiodinium minutum.
共生甲藻 Symbiodinium minutum 中聚酮合酶的全基因组调查。
DOI: --
发表时间: 2017
期刊:
影响因子: --
作者: [Girish Beedessee, Kanako Hisata, Sutada Mungpakdee, Noriyuki Satoh, Eiichi Shoguchi]
通讯作者: Eiichi Shoguchi
DOI: 10.1038/s41598-018-37792-0
发表时间: 2019-02-04
期刊: SCIENTIFIC REPORTS
影响因子: 4.6
作者: [Beedessee, Girish, Hisata, Kanako, Shoguchi, Eiichi]
通讯作者: Shoguchi, Eiichi