Method development for simultaneous automatic assignment and structure determination in protein NMR
Method development for simultaneous automatic assignment and structure determination in protein NMR
批准号:
10373305
负责人:
Rongjie Lai
金额:
$22.34万
依托单位国家:
美国
项目类别:
财政年份:
2022
资助国家:
美国
项目状态:
已结题
起止时间:
2022-09-12 至 2024-08-31
关键词:
3-DimensionalAlgorithmsAmino Acid SequenceBenchmarkingBiochemistryBiomedical ResearchChemicalsCollectionCommunitiesComputer softwareConsumptionCrystallizationDataData AnalysesData SetEnzymatic BiochemistryEuclidean SpaceGeometryGoalsHomology ModelingLiteratureManualsMathematicsMethodsModelingNOESYProteinsProtonsResolutionScienceShapesStructureTOCSYTestingTimeUbiquitinValidationbasecostcyclophilin Ddeep learningdesigndrug discoveryexperimental studymathematical methodsmethod developmentnovelpointed proteinprogramsprotein structurereconstructionsoundtheoriesthree dimensional structuretool
中文摘要
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英文摘要
Protein NMR is a powerful tool for studying protein structure, dynamics and interactions at
atomic resolution. However, currently it is time-consuming and laborious to obtain NMR
resonance assignment and the NMR structure of a protein. Here we will leverage recent
advances in Euclidean distance geometry to develop a method for simultaneous
determination of resonance assignment and protein structure using only the NOESY spectra.
We have two aims: 1. Method development and validation using synthetic data based on
known protein structure; 2 Method development and validation using experimental NMR
data.
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Method development for simultaneous automatic assignment and structure determination in protein NMR
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批准号:10700808
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项目类别:
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资助金额:$19.28万
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财政年份:2022
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负责人:Rongjie Lai
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依托单位:
海外基金