SHOTGUN SEQUENCING OF MULTIPLE FULL LENGTH CDNA CLONES

这项研究的目的是开发和简化有效的方法 全长插入片段的快速准确测序，这是 随着大量新基因的出现，它变得越来越重要 是在人类基因组计划中发现的。一种同步的策略 多个高质量克隆的鸟枪法测序 “Soares”婴儿脑cDNA文库(INIB)将用于生成 100-300个独特的人类cdna克隆的完整序列。每个克隆人都将是 用微生物制备，并用消化法分离插入物 限制性内切酶后进行凝胶纯化。猎枪图书馆将 使用改进的“双适配器”方法构建。C DNA插入片段 将组合在20-100人的池中，并通过连接或形式连接 大约30-150kb的DNA片段。连体船将被剪断，并 随机克隆至M13载体。经过随机测序后，单个cDNA 序列将在组装阶段使用限制性内切酶进行鉴定 站点作为每个克隆末端的“标签”，而剩余的间隙和 完整的双链覆盖将通过使用引物- 定向测序。本研究将提供有用的人类cdna序列。 信息，这将导致方法的简化，以 快速生成全长cdna克隆序列。

The aim of this study is to develop and streamline efficient approaches for the rapid and accurate sequencing of full-length cDNA inserts, which is becoming increasingly important with the large number of novel genes discovered within the Human Genome Project. A strategy for simultaneous shotgun sequencing of multiple cDNA clones selected from high quality "Soares" infant brain cDNA library (INIB) will be used to generate the complete sequences of 100-300 unique human cDNA clones. Each clone will be prepared microbially and the inserts will be isolated by digestion with restriction enzymes followed by gel-purification. The shotgun library will be constructed using an improved "double adaptor" method. cDNA inserts will be combined in pools of 20-100 and concatenated by ligation ot form approximately 30-150 kb DNA fragments. The concatamers will be sheared and randomly cloned to M13 vector. After random sequencing, individual cDNA sequence will be identified at the assembly stage using restriction enzyme sites as "tags" for the ends of each clone, while remaining gaps and complete double-stranded coverage will be completed by using primer- directed sequencing. This study will provide useful human cDNA sequence information and it will result in streamlining of the methodology to rapidly generate full-length cDNA clone sequences.