IRIS MODEL 4D220 VGX WORKSTATION
IRIS MODEL 4D220 VGX WORKSTATION
批准号:
3521158
负责人:
Suse Broyde
金额:
$15.7万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
1991
资助国家:
美国
项目状态:
已结题
起止时间:
1991-02-05 至 1992-08-04
中文摘要
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英文摘要
Funds are sought for an IRIS Model 4D220 VGX Computer Graphics Workstation
and accessories from Silicon Graphics Computer Systems. This workstation
will be employed primarily by a group of five faculty and their associates
who are all engaged in investigating mechanisms of synthesis and structural
characterization of carcinogen-DNA adducts. The workstation will be
employed in molecular modeling of reaction mechanisms and adduct
conformations with the molecular modeling package INSIGHT/DISCOVER from
Biosym Technologies, Inc. In addition, the workstation will be used to
carry out molecular mechanics and molecular dynamics calculations for these
adducts with our own program, DUPLEX, and with AMBER. Use of the IRIS
workstation for the computation intensive molecular mechanics and dynamics
calculations will alleviate supercomputing resource constraints, and will
be far less costly. These computational efforts yield atomic resolution
views of adducts in agreement with experimental data obtained in solution
studies, and also offer plausible structural information for adducts where
no data is at hand.
期刊论文(8)
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Major and minor groove conformations of DNA trimers modified on guanine or adenine by 4-aminobiphenyl: adenine adducts favor the minor groove.
通过 4-氨基联苯:腺嘌呤加合物对鸟嘌呤或腺嘌呤进行修饰的 DNA 三聚体的大沟和小沟构象有利于小沟。
DOI:
10.1021/tx00043a016
发表时间:
1995
期刊:
Chemical research in toxicology
影响因子:
4.1
作者:
[Shapiro,R, Ellis,S, Hingerty,BE, Broyde,S]
通讯作者:
Broyde,S
Molecular dynamics simulation of a tumorigenic benzo[a]pyrene metabolite bound to DNA at a single strand-double strand junction.
在单链-双链连接处与 DNA 结合的致瘤苯并[a]芘代谢物的分子动力学模拟。
DOI:
--
发表时间:
1994
期刊:
Annals of the New York Academy of Sciences
影响因子:
5.2
作者:
[Singh,SB, Li,B, Hingerty,BE, Shapiro,R, Broyde,S]
通讯作者:
Broyde,S
The ray projection method: a numerical approach for determining ideal camera placement.
射线投影法:一种用于确定理想相机位置的数值方法。
DOI:
10.1123/jab.23.1.79
发表时间:
2007
期刊:
Journal of applied biomechanics
影响因子:
1.4
作者:
[Manal,Kurt, Gardinier,Joseph]
通讯作者:
Gardinier,Joseph
Conformational determinants of structures in stereoisomeric cis-opened anti-benzo[a]pyrene diol epoxide adducts to adenine in DNA.
DNA 中腺嘌呤立体异构顺式开环抗苯并[a]芘二醇环氧化物加合物结构的构象决定因素。
DOI:
10.1021/tx000094q
发表时间:
2000
期刊:
Chemical research in toxicology
影响因子:
4.1
作者:
[Tan,J, Geacintov,NE, Broyde,S]
通讯作者:
Broyde,S
Conformation of amine-modified DNA: 2-aminofluorene- and 2-(acetylamino)fluorene-modified deoxydinucleoside monophosphates with all possible nearest neighbors. A comparison of search and optimization methods.
胺修饰 DNA 的构象:2-氨基芴和 2-(乙酰氨基)芴修饰的脱氧二核苷单磷酸与所有可能的最近邻居。
DOI:
10.1021/tx00038a018
发表时间:
1994
期刊:
Chemical research in toxicology
影响因子:
4.1
作者:
[Shapiro,R, Sidawi,D, Miao,YS, Hingerty,BE, Schmidt,KE, Moskowitz,J, Broyde,S]
通讯作者:
Broyde,S
共 7 条
Environmental DNA Lesions and Mutagenesis: Molecular Mechanisms of Lesion Recognition for Repair and Polymerase Bypass
-
批准号:10460604
-
项目类别:
-
资助金额:$37.2万
-
财政年份:2016
-
负责人:Suse Broyde
-
依托单位:
Environmental Carcinogen-DNA Adducts: NER Recognition
-
批准号:9275988
-
项目类别:
-
资助金额:$35.66万
-
财政年份:2016
-
负责人:Suse Broyde
-
依托单位:
Environmental DNA Lesions and Mutagenesis: Molecular Mechanisms of Lesion Recognition for Repair and Polymerase Bypass
-
批准号:10612958
-
项目类别:
-
资助金额:$35.61万
-
财政年份:2016
-
负责人:Suse Broyde
-
依托单位:
Environmental DNA Lesions and Mutagenesis: Molecular Mechanisms of Lesion Recognition for Repair and Polymerase Bypass
-
批准号:10293848
-
项目类别:
-
资助金额:$36.79万
-
财政年份:2016
-
负责人:Suse Broyde
-
依托单位:
STRUCTURAL STUDY OF A DNA ADDUCT DEVIRED FROM A TUMORIGENIC METABOLITE OF BENZO
-
批准号:7956119
-
项目类别:
-
资助金额:$0.08万
-
财政年份:2009
-
负责人:Suse Broyde
-
依托单位:
STRUCTURAL STUDY OF A DNA ADDUCT DEVIRED FROM A TUMORIGENIC METABOLITE OF BENZO
-
批准号:7723185
-
项目类别:
-
资助金额:$0.05万
-
财政年份:2008
-
负责人:Suse Broyde
-
依托单位:
STRUCTURAL STUDY OF A DNA ADDUCT DEVIRED FROM A TUMORIGENIC METABOLITE OF BENZO
-
批准号:7601434
-
项目类别:
-
资助金额:$0.03万
-
财政年份:2007
-
负责人:Suse Broyde
-
依托单位:
Aromatic Amine DNA Structures--Mutagenic Relevance
-
批准号:6522395
-
项目类别:
-
资助金额:$23.54万
-
财政年份:1997
-
负责人:Suse Broyde
-
依托单位:
DNA Lesion Structures: Mutagenicity and Repair
-
批准号:7280349
-
项目类别:
-
资助金额:$28.15万
-
财政年份:1997
-
负责人:Suse Broyde
-
依托单位:
Aromatic Amine DNA Structures--Mutagenic Relevance
-
批准号:6915508
-
项目类别:
-
资助金额:$28.13万
-
财政年份:1997
-
负责人:Suse Broyde
-
依托单位:
DNA Lesion Structures: Mutagenicity and Repair
-
批准号:7876627
-
项目类别:
-
资助金额:$28.42万
-
财政年份:1997
-
负责人:Suse Broyde
-
依托单位:
DNA Lesion Structures: Mutagenicity and Repair
-
批准号:7634396
-
项目类别:
-
资助金额:$28.44万
-
财政年份:1997
-
负责人:Suse Broyde
-
依托单位:
Aromatic Amine DNA Structures--Mutagenic Relevance
-
批准号:6369568
-
项目类别:
-
资助金额:$24.2万
-
财政年份:1997
-
负责人:Suse Broyde
-
依托单位:
DNA Lesion Structures: Mutagenicity and Repair
-
批准号:7140909
-
项目类别:
-
资助金额:$28.93万
-
财政年份:1997
-
负责人:Suse Broyde
-
依托单位:
DNA Lesion Structures: Mutagenicity and Repair
-
批准号:7474530
-
项目类别:
-
资助金额:$28.21万
-
财政年份:1997
-
负责人:Suse Broyde
-
依托单位:
AF AND AAF MODIFIED DNA STRUCTURES--MUTAGENIC RELEVANCE
-
批准号:2769970
-
项目类别:
-
资助金额:$13.25万
-
财政年份:1997
-
负责人:Suse Broyde
-
依托单位:
Aromatic Amine-DNA Lesions: Mutagenicity and Repair
-
批准号:8184287
-
项目类别:
-
资助金额:$28.78万
-
财政年份:1997
-
负责人:Suse Broyde
-
依托单位:
Aromatic Amine-DNA Lesions: Mutagenicity and Repair
-
批准号:8460862
-
项目类别:
-
资助金额:$27.04万
-
财政年份:1997
-
负责人:Suse Broyde
-
依托单位:
Aromatic Amine-DNA Lesions: Mutagenicity and Repair
-
批准号:8274634
-
项目类别:
-
资助金额:$28.77万
-
财政年份:1997
-
负责人:Suse Broyde
-
依托单位:
Aromatic Amine-DNA Lesions: Mutagenicity and Repair
-
批准号:8677708
-
项目类别:
-
资助金额:$28.1万
-
财政年份:1997
-
负责人:Suse Broyde
-
依托单位: