Methods for evolutionary analysis of eukaryotic transcriptional regulation

真核转录调控进化分析方法

• 批准号: 8208995
• 负责人: SRIDHAR HANNENHALLI
• 金额: $ 29.4万
• 依托单位: UNIV OF MARYLAND, COLLEGE PARK
• 依托单位国家: 美国
• 财政年份: 2008
• 资助国家: 美国
• 起止时间: 2008-06-20 至 2014-05-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8208995
• 关键词: Address; Back; Binding Sites; Biological Process; Caenorhabditis elegans; Cell Culture Techniques; Computational algorithm; DNA; DNA Binding; DNA Binding Domain; DNA-Binding Proteins; Data; Data Set; Development; Developmental Process; Elements; Eukaryota; Event; Evolution; Family; Family member; Foxes; Gene Duplication; Gene Expression; Gene Family; Genes; Genetic Polymorphism; Genetic Transcription; Genome; Genomics; Heart failure; Human; In Vitro; Indium; Individual; Investigation; Literature; Mammals; Maps; Measurable; Methods; Modeling; Mus; Organism; Pathway interactions; Pattern; Phylogenetic Analysis; Play; Population; Proteins; RNA Interference; Regulatory Element; Research; Source; Stress; Structure; Tertiary Protein Structure; Testing; Time; Transcription Factor 3; Transcription factor genes; Transcriptional Regulation; Transgenic Mice; Winged Helix; Work; Yeasts; base; cardiogenesis; comparative; design; disease phenotype; fitness; fly; gene function; genome-wide; human disease; human tissue; improved; innovation; insight; interest; lung development; member; novel; paralogous gene; pressure; public health relevance; research study; tool; transcription factor

项目成果

Genome-wide survey of natural selection on functional, structural, and network properties of polymorphic sites in Saccharomyces paradoxus.

• DOI: 10.1093/molbev/msr085
• 发表时间: 2011-09
• 期刊: Molecular biology and evolution
• 影响因子: 10.7
• 作者: A. Vishnoi;P. Sethupathy;D. Simola;J. Plotkin;S. Hannenhalli

A tutorial of the poisson random field model in population genetics.

人口遗传学中泊松随机场模型的教程。

• DOI: 10.1155/2008/257864
• 发表时间: 2008
• 期刊: Advances in bioinformatics
• 作者: Sethupathy P;Hannenhalli S
• 通讯作者: Hannenhalli S

Accelerated evolution of 3'avian FOXE1 genes, and thyroid and feather specific expression of chicken FoxE1.

3禽 FOXE1 基因的加速进化，以及鸡 FoxE1 的甲状腺和羽毛特异性表达。

• DOI: 10.1186/1471-2148-11-302
• 发表时间: 2011
• 期刊: BMC evolutionary biology
• 影响因子: 3.4
• 作者: Yaklichkin,SergeyYu;Darnell,DianaK;Pier,MaricelaV;Antin,ParkerB;Hannenhalli,Sridhar
• 通讯作者: Hannenhalli,Sridhar

Motifs and cis-regulatory modules mediating the expression of genes co-expressed in presynaptic neurons.

• DOI: 10.1186/gb-2009-10-7-r72
• 发表时间: 2009
• 期刊: Genome biology
• 影响因子: 12.3
• 作者: Liu R;Hannenhalli S;Bucan M
• 通讯作者: Bucan M

Developmental expression of chicken FOXN1 and putative target genes during feather development.

• DOI: 10.1387/ijdb.130023sy
• 发表时间: 2014-02
• 期刊: The International journal of developmental biology
• 作者: D. Darnell;L. S. Zhang;S. Hannenhalli;S. Yaklichkin