Deep Sequencing Core

深度测序核心

• 批准号: 8379864
• 负责人: PETER Andreas KOPP
• 金额: $ 3.77万
• 依托单位: NORTHWESTERN UNIVERSITY AT CHICAGO
• 依托单位国家: 美国
• 资助国家: 美国
• 起止时间: 至
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/8379864
• 关键词: Bioinformatics; Biotechnology; Blood capillaries; Code; Communities; Comprehensive Cancer Center; Core Facility; DNA; DNA Sequencing Facility; Data; Development; Emerging Technologies; Ensure; Faculty; Genomics; Genotype; Information Centers; Laboratories; Leadership; Malignant Neoplasms; Research; Research Personnel; Resource Sharing; Scientist; Services; System; Technology; Translations; Universities; Work; base; capillary; computerized data processing; high throughput analysis; medical schools; meetings; member; next generation

Deep Sequencing technology represents a distinct new service line within the Genomics Core Facility, the development of which will be instrumental to several of the NU-PSOC research. Deep-sequencing is performed on a SOLID¿ next-generation sequencing system from Applied Biosystems. The data are processed by a data manager who is exclusively working with this platform. The analysis of high-throughput sequencing data is performed on a 200 node computational cluster located within the CGM. In addition, the Genomics Core collaborates closely with the Bioinformatics Core of the Northwestern University Biomedical Information Center (NUBIC).

深度测序技术代表了基因组学核心设施内一个独特的新服务线，其开发将有助于NU-PSOC的几项研究。深度测序在来自Applied Biosystems的SOLID下一代测序系统上进行。数据由专门使用该平台的数据管理员处理。高通量测序数据的分析在位于CGM内的200节点计算集群上进行。此外该 Genomics Core与西北大学生物医学信息中心（NUBIC）的生物信息学核心密切合作。