TraitCapture: Genomic modelling for plant phenomics under environmental stress

TraitCapture：环境胁迫下植物表型组学的基因组建模

• 批准号: LP140100572
• 负责人: Prof Justin Borevitz
• 金额: $ 44.41万
• 依托单位: The Australian National University
• 依托单位国家: 澳大利亚
• 项目类别: Linkage Projects
• 财政年份: 2015
• 资助国家: 澳大利亚
• 起止时间: 2015-04-01 至 2017-12-31
• 项目状态: 已结题
• 来源: https://dataportal.arc.gov.au/RGS/Web/Grants/LP140100572
• 关键词: TraitCapture; Genomic; modelling; plant; phenomics

This project aims to develop software to integrate new hyper-spectral and 3D growth models of plant phenomics with population genomics to identify heritable developmental traits across varied environments. Genome wide association studies aim to then be used to identify causal genes. Functional structural plant models incorporating genetic variation will be used to predict growth under simulated stress environments. The research team unites international industry, the Australian Plant Phenomics Facility, and university statistical geneticists. TraitCapture software will use open standards applicable to both controlled and field environments enabling plant breeders to pre-select adaptive traits to increase crop productivity under environmental stress.

该项目旨在开发软件，将植物表现学的新的高光谱和3D生长模型与种群基因组学相结合，以确定不同环境中的可遗传发育特征。全基因组关联研究的目标是随后用于识别因果基因。包含遗传变异的功能结构植物模型将用于预测模拟胁迫环境下的生长。该研究小组联合了国际工业界、澳大利亚植物表型组学设施和大学统计遗传学家。TraitCapture软件将使用适用于受控和田间环境的开放标准，使植物育种者能够预先选择适应性特征，以提高环境压力下的作物生产率。