COBRE: UID: BIOINFORMATICS CORE FACILITY
COBRE:UID:生物信息学核心设施
基本信息
- 批准号:7720640
- 负责人:
- 金额:$ 23.98万
- 依托单位:
- 依托单位国家:美国
- 项目类别:
- 财政年份:2008
- 资助国家:美国
- 起止时间:2008-05-15 至 2009-01-31
- 项目状态:已结题
- 来源:
- 关键词:AdministratorArchitectureBioinformaticsBiological ModelsBiomedical ResearchBiteCenters of Research ExcellenceComputational BiologyComputer Retrieval of Information on Scientific Projects DatabaseComputer softwareComputersCore FacilityDataDatabasesDoctor of PhilosophyEducational workshopFacultyFosteringFundingFutureGrantIdahoInstitutionLicensingPerformanceProductionRecruitment ActivityResearchResearch PersonnelResearch Project GrantsResearch TrainingResourcesSideSourceStudentsSystemTelecommunicationsTestingTimeTrainingUnited States National Institutes of HealthWorkcluster computingimprovedmolecular modelingpostersprograms
项目摘要
This subproject is one of many research subprojects utilizing the
resources provided by a Center grant funded by NIH/NCRR. The subproject and
investigator (PI) may have received primary funding from another NIH source,
and thus could be represented in other CRISP entries. The institution listed is
for the Center, which is not necessarily the institution for the investigator.
This project implements a bioinformatics core facility, which provides hardware, software, educational/training capabilities, and staffing that enable biomedical researchers to analyze and model biological data. This core is funded by COBRE in conjunction with other sources such as the Idaho BRIN and INBRE Programs (P20RR16454). In the last year, with COBRE funds, we have increased the available disk storage, in order to accommodate exponentially increasing databases. Using other funds, we have also built a new high performance (64-bit, 16 node Xserve) cluster computer, as a test platform for exploring future cluster architectures, and added a third (more powerful) Sun V880 server On the software side, we have upgraded our core bioinformatics software for both research and training, and have augmented our mathematical and molecular modeling capabilities. We have also expanded our MS/PhD program in Bioinformatics and Computational Biology (BCB) to 17 doctoral students and 3 MS students. Most students are working on research projects with COBRE faculty. We also offered formal courses, participated in the third annual BRIN Bioinformatics Workshop, and hosted a COBRE poster session in September. Staff in this core now include: James A. Foster, Director; Ken Blair, Systems Administrator; Celeste Brown, Bioinformatics Coordinator; four student assistant systems administrators; and two student programmers. Our plans for this year are: to improve the production cluster computer to improve availability and reliability, to recruit a second, full-time systems administrator for cluster computing, and to renew software licenses. We are also assisting with the NIH Lariat project, a BRIN supplement to enhance telecommunications in support of collaborative biomedical research among IDEA states in our region.
这个子项目是众多研究子项目之一
项目成果
期刊论文数量(0)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
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James A. Foster其他文献
An Evolutionary, Biosocial Perspective on Variation in Human Milk Microbes and Oligosaccharides: An Example of Eco-Homeorhesis?
关于母乳微生物和寡糖变异的进化、生物社会视角:生态顺势流失的一个例子?
- DOI:
10.1016/b978-0-12-802725-7.00014-2 - 发表时间:
2016 - 期刊:
- 影响因子:4.9
- 作者:
M. McGuire;C. Meehan;Sarah L. Brooker;Janet E. Williams;James A. Foster;M. McGuire - 通讯作者:
M. McGuire
Shell Disorder Models Detect that Attenuated Omicron has Harder Shells but is not a Descendant of the Wuhan (SARS-CoV-2) Strain
外壳紊乱模型检测到减毒 Omicron 外壳较硬,但不是武汉 (SARS-CoV-2) 毒株的后代
- DOI:
- 发表时间:
2022 - 期刊:
- 影响因子:0
- 作者:
G. Goh;A. Dunker;James A. Foster;V. Uversky - 通讯作者:
V. Uversky
Taking “biology” just seriously enough: Commentary on “On the Mapping of Genotype to Phenotype in Evolutionary Algorithms” by Peter A. Whigham, Grant Dick, and James Maclaurin
- DOI:
10.1007/s10710-017-9296-x - 发表时间:
2017-02-24 - 期刊:
- 影响因子:0.900
- 作者:
James A. Foster - 通讯作者:
James A. Foster
Nipah shell disorder, modes of infection, and virulence
尼帕壳病、感染方式和毒力
- DOI:
- 发表时间:
2020 - 期刊:
- 影响因子:3.8
- 作者:
G. Goh;A. Dunker;James A. Foster;V. Uversky;V. Uversky - 通讯作者:
V. Uversky
Introduction to special section: Best of EuroGP/EvoBio
- DOI:
10.1007/s10710-013-9194-9 - 发表时间:
2013-07-04 - 期刊:
- 影响因子:0.900
- 作者:
James A. Foster - 通讯作者:
James A. Foster
James A. Foster的其他文献
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{{ truncateString('James A. Foster', 18)}}的其他基金
COBRE: UID: PROJ 4: COMPUTATIONAL & MATHEMATICAL ANALYSIS OF BIOMEDICAL DATA
COBRE:UID:项目 4:计算
- 批准号:
7720638 - 财政年份:2008
- 资助金额:
$ 23.98万 - 项目类别:
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