Bioinformatics core
Bioinformatics core
批准号:
9041604
负责人:
Zhaohui Qin
金额:
$19.94万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
--
资助国家:
美国
项目状态:
未结题
起止时间:
至
关键词:
AddressArchitectureBioinformaticsBiologicalBiometryCell CycleCell Cycle RegulationCellsChromatinChromosome StructuresChromosomesCollaborationsComputational algorithmComputer softwareDataData AnalysesData SetDevelopmentGene Expression RegulationGenesGenetic TranscriptionGoalsImageryKnowledgeLearningMediatingMethodsMissionMolecularPathogenesisPhasePluripotent Stem CellsPopulationPositron-Emission TomographyPostdoctoral FellowProceduresProcessPublic HealthResearchResearch PersonnelResearch Project GrantsRoleSeriesServicesStatistical ModelsTechniquesTechnologyTimeUniversitiesUpdateWorkchromosome conformation capturechromosome replicationcomplement C4ccomputerized toolsdesignexperiencegene therapygenome-widegenomic datagraduate studenthigh throughput analysishuman diseasehuman embryonic stem cellimprovedinsightmid-career facultynext generation sequencingprogramsresearch studyself-renewaltranscriptome sequencing
中文摘要
生物信息学核心(核心B)的目的是提供以下方面的统计和生物信息学分析:
各种高通量基因组学数据,主要来自测序应用,如ChIP-seq,RNA-seq,
Hi-C、ChlA-PET、4C-seq和复制定时实验。三个项目中的每一个都利用了下一个
代测序技术(NGS),以解决与细胞周期控制,染色体
多能干细胞中的结构和细胞命运决定。我们的核心将提供全面的数据
为该项目的研究人员提供分析服务。该核心的主要研究者和支持人员
在高通量基因组学数据分析方面拥有丰富的经验,尤其是NGS数据。除了
基本数据分析,我们将与三个项目的调查人员密切合作,以确定新出现的
现有方法和软件没有充分解决的问题。这将涉及
开发改进的概率模型、计算机算法和分析战略,
分析.
英文摘要
The purpose of the Bioinformatics Core (Core B) is to provide statistical and bioinformatics analysis of
various high-throughput genomics data, primarily from sequencing applications such as ChlP-seq, RNA-seq,
Hi-C, ChlA-PET, 4C-seq and replication timing experiments. Each of the three Projects utilize next
generation sequencing technologies (NGS) to address questions relating to cell cycle control, chromosome
architecture and cell fate decisions in pluripotent stem cells. Our core will provide comprehensive data
analysis service to investigators of this Program Project. The PI and supporting staff of this Core have
extensive experience in the analysis of high-throughput genomics data, especially NGS data. In addition to
basic data analyses, we will work closely with investigators from the three Projects to identify emerging
problems that are not addressed sufficiently by existing methods and software. This will involve the
development of improved probability models, computer algorithms and analytical strategies to improve data
analysis.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
Dissecting epitranscriptomic signal from complex tissues
-
批准号:10677011
-
项目类别:
-
资助金额:$32.89万
-
财政年份:2021
-
负责人:Zhaohui Qin
-
依托单位:
Dissecting epitranscriptomic signal from complex tissues
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批准号:10750491
-
项目类别:
-
资助金额:$12.94万
-
财政年份:2021
-
负责人:Zhaohui Qin
-
依托单位:
Statistical Methods to Analyze Resequencing Data
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批准号:8149999
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项目类别:
-
资助金额:$19.27万
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财政年份:2010
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负责人:Zhaohui Qin
-
依托单位:
Statistical Methods to Analyze Resequencing Data
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批准号:7897103
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项目类别:
-
资助金额:$19.27万
-
财政年份:2010
-
负责人:Zhaohui Qin
-
依托单位:
Model-Based Methods for Analyzing ChIP Sequencing Data
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批准号:8145723
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项目类别:
-
资助金额:$29.48万
-
财政年份:2009
-
负责人:Zhaohui Qin
-
依托单位:
Model-Based Methods for Analyzing ChIP Sequencing Data
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批准号:7895771
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项目类别:
-
资助金额:$29.24万
-
财政年份:2009
-
负责人:Zhaohui Qin
-
依托单位:
Model-Based Methods for Analyzing ChIP Sequencing Data
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批准号:8303427
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项目类别:
-
资助金额:$29.48万
-
财政年份:2009
-
负责人:Zhaohui Qin
-
依托单位:
Model-Based Methods for Analyzing ChIP Sequencing Data
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批准号:7714427
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项目类别:
-
资助金额:$29.54万
-
财政年份:2009
-
负责人:Zhaohui Qin
-
依托单位:
PERFUSION MAPPING WITH MULTIECHO MULTISHOT PARALLEL IMAGING EPI
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批准号:7722932
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项目类别:
-
资助金额:$2.8万
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财政年份:2008
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负责人:Zhaohui Qin
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依托单位:
NON-DIFFUSION MAPPING OF WHITE MATTER PROTONS
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批准号:7601900
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项目类别:
-
资助金额:$1.73万
-
财政年份:2007
-
负责人:Zhaohui Qin
-
依托单位:
WIMP: SELF-NAVIGATING MAGNETIZATION TRANSFER POOL MAPPING WITH STIMULATED ECHOES
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批准号:7358807
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项目类别:
-
资助金额:$0.94万
-
财政年份:2006
-
负责人:Zhaohui Qin
-
依托单位:
QUANTITATIVE MAGNETIZATION TRANSFER BOUND POOL MAPPING AT 3T
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批准号:7358806
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项目类别:
-
资助金额:$0.94万
-
财政年份:2006
-
负责人:Zhaohui Qin
-
依托单位:
Bioinformatics core
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批准号:8641834
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项目类别:
-
资助金额:$20.53万
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财政年份:--
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负责人:Zhaohui Qin
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依托单位:
Bioinformatics core
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批准号:9234023
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项目类别:
-
资助金额:$20.77万
-
财政年份:--
-
负责人:Zhaohui Qin
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依托单位:
海外基金