小麦成株期抗条锈病位点QYr.cim-2AS的精细定位与候选基因分析
批准号:
32101712
项目类别:
青年科学基金项目(C类)
资助金额:
30.0 万元
负责人:
刘德梅
依托单位:
学科分类:
作物种质资源学
结题年份:
2024
批准年份:
2021
项目状态:
已结题
项目参与者:
刘德梅
中文摘要
小麦条锈病是影响全球小麦产量的叶部病害,利用成株抗性基因育种已是小麦抗病育种的主要方向,而且兼抗型成株抗性基因的合理利用更是全球小麦抗病育种的重要策略,发掘新的兼抗多种病害的成株抗性的QTL,找到与其紧密连锁或者共分离分子标记,对培育持久抗病育种极为重要。本项目利用仅含成株抗性位点QYL.cimmyt-2AS的3个Apav#1/Mucuy重组自交系分别与感病亲本Apav#1进行杂交并回交1次构建的次级群体和突变群体进行精细定位,2022年和2024年分别在在青海、甘肃和湖北试验基地进行条锈病成株抗性鉴定,选用小麦条锈病生理混合小种进行人工接种。结合90KSNP芯片数据和BSA-RNA-Seq测序技术,根据中国春基因组的注释信息,找到潜在的候选基因,分析候选基因序列。此研究为分子标记辅助育种奠定基础。
英文摘要
Stripe rust caused by Puccinia striiformis f. sp. tritici (Pst) is a devastating foliar diseases that threat wheat production in many regions of the world. Deployment adult-plant resistant cultivars by marker assistant selection conferred to mainstream in future, and Slow rusting adult-plant resistance (APR) genes play an important role in ensuring their appropriate deployment in wheat resistant disease breeding around the world. It is very important to identify closely co-segregated molecular markers to APR gene for durable resistance to stripe rust. 3 F5 recombinant inbred lines (RILs) derived from a cross between Apav#1 and susceptible line Mucuy, which only carry APR QTL QYr.cim-2AS, were separately used to cross with Apav#1 for constructing sub-population and EMS population . The sub-population willplant in experimental agriculture stations of Qinghai, Gansu and Hubei, respectively, for stripe rust evaluation during 2022-2024 crop seasons. Artificial inoculations in both stations will carry out using the highly virulent P. striiformis Chinese races CYR33 approximately one month after sowing. Disease severity of stripe rust on parents and lines will score twice in 2022 and 2024, respectively, according to the Modified Cobb Scale, where percentage of rust tissue is visually estimated. Stripe rustseverity will rate when the susceptible parent Apav#1 displayed 90-100% severity. In order to find 2-3 co-segregated molecular makers to QYL.cim-2AS, 2000 BC1F2 lines will be used to fine map this locus with BSA-RNA-Seq and 90K SNP. Finally, analyse the condidate gene sequence. The study of APR gene laid the foundation for the molecular assistant breeding.
本研究围绕小麦条锈病成株抗性兼抗基因 QYr.cim- 2AS的精细定位与候选基因分析展开系统研究,已完成项目申请书中的各项研究目标。通过群体遗传学分析与分子标记技术相结合,成功将目标抗性基因精细定位至节节麦2NS易位染色体片段上的分子标记1208841与978751之间区域。基于Jagger参考基因组(IWGSC 2018),构建了覆盖15.4 - 15.7 Mb抗性位点的物理图谱,揭示VPM片段在染色体水平上的特殊结构特征。基于群体共分离分析,开发了特异性InDel分子标记InD_hzau_MuYLr - 2AS,并揭示该抗性位点在国内外小麦种质资源中的分布规律,为抗病品种选育提供了分子标记辅助选择工具。.通过转录组测序与GBS技术联用,筛选出7个候选基因(TraesJAG2A01G002600.1、 TraesJAG2A01G002700.1、TraesJAG2A01G003400.1、 TraesJAG2A01G012100.1、TraesJAG2A01G018700.1、TraesJAG2A01G020600.1、TraesJAG2A01G024400.1),并进行功能验证。对QYr.cimmyt-2AS候选区间内的7个候选基因进行测序。其中TraesJAG2A01G002600.1、 TraesJAG2A01G003400.1和TraesJAG2A01G020600.1三个候选基因在抗病材料中的上调表达与抗病表型呈现显著相关性。利用CRISPR/Cas9技术对候选基因进行定向编辑,成功构建7个转基因株系,其中获得TraesJAG2A01G003400.1基因编辑苗一株,此材料对抗病表型的稳定性还需进一步验证。
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