MYB转录因子BnWERs调控甘蓝型油菜根毛发育的分子机制研究
批准号:
32072094
项目类别:
面上项目
资助金额:
58.0 万元
负责人:
杜海
依托单位:
学科分类:
作物基因组及遗传学
结题年份:
2024
批准年份:
2020
项目状态:
已结题
项目参与者:
杜海
中文摘要
根毛(Root hairs)对根系吸收土壤水分和矿质养分起关键作用,因此对油菜养分吸收、抗逆和产量均很重要。前期我们在油菜基因组中筛选/克隆了4个R2R3-MYB转录因子基因(简称BnWERs),通过功能互补、超量表达等实验证明了候选BnWERs对根毛发育具有调控作用。本项目拟在此基础上:(1)利用基因沉默、超量表达、功能互补等实验明确候选BnWERs对油菜根毛发育的调控作用及其与养分吸收、抗逆、产量的关系;(2)结合ChIP-Seq、共表达分析和多组学实验鉴定候选BnWERs调控的靶基因和靶位点,阐明其分子机制;(3)通过Y2H、BiFC和Co-IP-MS实验探究候选BnWERs蛋白的互作蛋白及其互作机制;(4)解析候选基因及其靶基因在油菜重测序材料中的遗传变异规律及其与养分吸收、抗逆、产量的关系。本项目将促进油菜根毛发育的基础研究,为高产分子育种提供理论依据和基因资源。
英文摘要
Root hairs play a key role in plant absorbing of water and mineral nutrients distributed in soil, thereby is important for nutrient absorption, stress resistance, and yield of Brassica napus. Four R2R3-MYB transcription factor genes (BnWERs) were identified and cloned from B. napus genome in our previous study. Subsequently, the regulating roles of these four candidate BnWERs in root hairs development were confirmed by functional complementation assay, over-expression assay, etc. Based on those results, the present project will focus on the following four issues: (1) confirming the roles of candidate BnWERs involved in regulating B. napus root hairs development, and their impact on B. napus nutrient absorption efficiency, stress resistence, and yield, by gene silencing (gene editing), over-expression, and functional complementation experiments; (2) identifying the downstream target genes and binding sites of candidate BnWERs proteins in B. napus genome, and their regulating mechanisms involved in root hairs development by ChIP-Seq, Co-expression analysis, RNA-Seq, and Multi-Omics analysis; (3) identifying the interaction proteins and the protein interaction mechanisms of candidate BnWERs proteins by yeast two hybrid assay (Y2H), Bimolecular fluorescence complementation (BiFC), and Co-immunoprecipitation and mass spectrometry assay (Co-IP-MS); (4) exploring the genomic variation profiles of candidate BnWERs and their target genes in 600 re-sequencing B. napus gerplasms, and the correlation between the genomic variation profiles of candidates and the nutrient uptake efficiency, stress resistence, and yield of B. napus, etc. Our results will promote the fundamental research of B. napus root hairs development as well as provide theoretical foundation and gene resources for Molecular Breeding to improve B. napus yield.
根毛(Root hairs)对根系吸收土壤水分和矿质养分起关键作用,因此对油菜养分吸收、抗逆和产量均很重要。因此,挖掘油菜中调控根毛发育的关键基因,阐明其分子机制,兼具理论研究价值和应用前景。鉴于此,本研究利用生物信息学的方法挖掘油菜基因组中调控根毛发育的候选基因,并联合分子生物学等多学科的技术深入研究候选基因的分子作用机制。本研究的主要结果包括:(1)基于乙烯和乙烯抑制剂处理的极端根毛密度表型的组织,采用RNA-seq方法在甘蓝型油菜中鉴定出4个R2R3-MYB转录因子基因BnaWERs。序列一致性和表达谱分析证明他们功能冗余。BnaWER的启动子活性在根表皮细胞的顶端分生组织区和伸长区优势表达。(2)BnaWER过表达导致甘蓝型油菜根毛密度降低,进一步抑制甘蓝型油菜各发育阶段的生长发育。qRT-PCR、GUS染色和激光共聚焦分析显示,缺磷(-Pi)和乙烯(ACC)诱导下BnaWER表达下调,而-Pi诱导过表达的甘蓝型油菜恢复到野生型(WT)的水平。(3)RNA-seq、CUT&Tag、双荧光素酶实验和EMSA分析共同表明,BnaWER分别结合到BnaCPC和BnaGL2基因的启动子区域,促进其活性。(4)BnaCPC过表达导致甘蓝型油菜根毛密度升高,进一步促进甘蓝型油菜在不同发育阶段的生长发育。RNA-seq和双荧光素酶实验结果表明,BnaCPC结合BnaGL2基因的启动子上的相同顺式作用元件,但抑制其活性。(5)酵母双杂交和荧光素酶互补实验结果证实,BnaWER和BnaCPC蛋白均可与BnGL3蛋白相互作用,BnTTG1可与BnGL3相互作用,从而形成MBW复合物。(6)迄今,本项目已经支持6名研究生完成了毕业论文并以第一标注发表了SCI论文5篇。本研究结果表明,BnaWER通过与BnaCPC竞争形成MBW三元蛋白复合体并激活或抑制BnaGL2基因的表达来调控根毛密度,该研究结果为提高甘蓝型油菜的产量和抗逆性提供了一种策略。
油菜MYB转录因子BnMYBR042调控根毛发育的分子机制研究
-
批准号:CSTB2023NSCQ-MSX0744
-
项目类别:省市级项目
-
资助金额:10.0万元
-
批准年份:2023
-
负责人:杜海
-
依托单位:
BnMYB93s转录因子基因调控甘蓝型油菜侧根发育的分子机制研究
-
批准号:31671727
-
项目类别:面上项目
-
资助金额:62.0万元
-
批准年份:2016
-
负责人:杜海
-
依托单位:
甘蓝型油菜硫苷合成调控和转运关键基因的克隆及作用机制研究
-
批准号:31471528
-
项目类别:面上项目
-
资助金额:70.0万元
-
批准年份:2014
-
负责人:杜海
-
依托单位:
国内基金
海外基金