课题基金 / 基金详情

真菌Fusicoccane型萜类环化酶催化机制系统性研究及其理性改造

批准号:
32070042
项目类别:
面上项目
资助金额:
58.0 万元
负责人:
王永恒
依托单位:
学科分类:
微生物生理与生化
结题年份:
2024
批准年份:
2020
项目状态:
已结题
项目参与者:
王永恒

项目摘要

结项摘要

王永恒的其他基金

相似基金

相关文献

中文摘要
Fusicoccane型萜类天然产物具有独特的5-8-5稠环骨架结构和多样的生物活性,引起了科学界的广泛兴趣。现报道该类化合物的数目已超过300,而已发现的该类环化酶却只有8个,包括文献报道的1个细菌和4个真菌来源及本课题组前期发现的3个真菌来源的酶,且绝大部分真菌酶催化的合环机制不清楚。此外,我们前期初步研究发现真菌酶与细菌酶在环化机制上有较大差别(ACS Catal. 2020, 10, 4306-4312)。基于前期工作,本项目拟运用量子化学计算、经典分子动力学模拟及QM/MM分子动力学模拟等理论手段和同位标记、定点突变等实验手段,对真菌中该类酶催化机制展开系统性研究,包括相关碳正离子内禀性、代表性酶的催化机理及酶的“监护”作用,总结酶调控相关规律,设计突变方案对酶的活性口袋进行理性改造以拓展这类酶的催化功能。本项目将解决真菌中该类酶催化过程中的诸多科学问题,具有多方面的研究意义。
英文摘要
Fusicoccane-type terpenoid natural products have a unique 5-8-5 fused-ring skeleton and diverse biological activities, which have attracted broad interest from the scientific community. It is reported that the number of such compounds has exceeded 300, while only eight such cyclases have been found, including one bacterial and four fungal sources reported by the literatures and three fungal sources previously discovered by our group. And most of the fungal enzyme-catalyzed the ring-closure mechanisms are unclear. Moreover, we found apparent differences between the catalytic mechanisms of fungal and bacterial enzymes in our early preliminary study (ACS Catal. 2020, 10, 4306 -4312). Based on the previous work, this project intends to use theoretical methods such as quantum chemical calculations, classical molecular dynamics simulations and QM/MM molecular dynamics simulations, as well as experimental methods such as isotope labeling and site-directed mutation, to carry out systematic studies on catalytic mechanism of such enzymes in fungi, including the intrinsic nature of the carbocations, the catalytic mechanisms of the representative enzymes and the "chaperone" role of the enzyme, summarize the relevant law of enzymatic regulation, and design mutant schemes to modify the active pockets of the enzymes, expanding the catalytic function of such enzymes. This project will solve many scientific problems in the catalytic process of this type of enzymes in fungi, and has multiple research significances.
Fusicoccane型萜萜类环化酶催化GGPP形成5-8-5稠环萜类骨架。含该类骨架的萜类化合物具有广泛的生物活性。双键和羟基取代位置及立体化学的不同导致了5-8-5稠环骨架多样性,从而导致不同的生物活性。阐明这类骨架的形成机制及区域/立体化学调控机制具有重要意义。该项目从活性中间体的内禀性出发,全面揭示了5-8-5型萜类骨架碳正离子性质及反应性,初步构建了反应网络,可用于指导酶催化反应机理研究。然后展开全原子水平的酶体系QM/MM分子动力学模拟,阐明了代表性5-8-5型萜类环化酶体系(MgMS、SDS、AfAS和PAFS)的酶催化机制,并比较总结立体化学调控相关规律。首次提出蛋白主链羰基作为去质子化的碱,为萜类酶催化领域长期悬而未决的“质子穿梭”问题提供了解决方案。在区域/立体化学调控理论的指导下成功实现了对该类酶的初步理性改造,并实现了功能转换。最后,将上述反应性规律及立体化学调控规律推广至自由基反应和手性膦酸催化。共发表SCI高水平论文5篇,其中影响因子大于10的论文4篇,大于40的论文1篇。
四环/五环三萜环化酶催化与调控机制系统性研究及其理性改造
  • 批准号:
    --
  • 项目类别:
    省市级项目
  • 资助金额:
    100.0万元
  • 批准年份:
    2022
  • 负责人:
    王永恒
  • 依托单位:
倍半萜合酶FSTS/SDS催化机制及其化学多样性调控研究
  • 批准号:
    21803080
  • 项目类别:
    青年科学基金项目
  • 资助金额:
    25.0万元
  • 批准年份:
    2018
  • 负责人:
    王永恒
  • 依托单位:
国内基金
海外基金